ggKbase home page

13_1_40cm_3_scaffold_332345_1

Organism: 13_1_40CM_3_Thaumarchaeota_50_5

near complete RP 30 / 55 MC: 2 BSCG 17 / 51 MC: 1 ASCG 35 / 38 MC: 3
Location: 1..609

Top 3 Functional Annotations

Value Algorithm Source
deaD; DEAD/DEAH box helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] Tax=RBG_16_Archaea_50_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.1
  • Coverage: 174.0
  • Bit_score: 163
  • Evalue 2.50e-37
DEAD-box ATP-dependent RNA helicase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL30_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 204.0
  • Bit_score: 160
  • Evalue 1.90e-36
DEAD/DEAH box helicase similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 204.0
  • Bit_score: 160
  • Evalue 5.50e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Archaea_50_20_curated → Archaea

Sequences

DNA sequence
Length: 609
CAGAAATATACATGGGCTGAAGAGAATGAAAAGTTCCCGGCTCTCTGCTCCCTTCTAGAAGCCGAGAAGGTAACCAGAGGACTCATATTCTGTTCGACCAAGATCAGAGCCGGTCGACTTGCTCAAGCCCTAAGAGTAGAGGGCTACAATGCGGTAGCGATTCATGGAGACCTTTCTCAAGGTCAAAGAGATAGGGCAATGCAGGCTTTTCGCGACGGATCAGTCGCGGTTCTAGTCGCTACTGACGTGGCGGCCAGGGGGCTCGACATTACGAACGTAAGCCACGTGATTAACTTCGACCTACCGGAAGAACCCCTCACATACTTCCATAGAATCGGTAGAACCGCACGAGCCGGAAGTGCTGGAATCGCAGTCTCCCTTGTAAGCCGAAGCGATGACTCCATCTTTGAGAGAATAAGACGGACAACTTCCTCAAATATTCAAGAGATGATTAGATTGACGTCCCCGGGTCGAAGATCGTACCCGACGCTTTTCTTGCCGCCTCGTCCTTATGGTCCGAGGAGAGGCGGGGAGAGACACCAGAGAGGTCGTGGAAGGCGTCCAGCGCGTCGTCCCCCGAGATTCCAACGTCACAGACGTCGATATTAG
PROTEIN sequence
Length: 203
QKYTWAEENEKFPALCSLLEAEKVTRGLIFCSTKIRAGRLAQALRVEGYNAVAIHGDLSQGQRDRAMQAFRDGSVAVLVATDVAARGLDITNVSHVINFDLPEEPLTYFHRIGRTARAGSAGIAVSLVSRSDDSIFERIRRTTSSNIQEMIRLTSPGRRSYPTLFLPPRPYGPRRGGERHQRGRGRRPARRPPRFQRHRRRY*