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13_1_40cm_3_scaffold_7062_24

Organism: 13_1_40CM_3_Thaumarchaeota_50_5

near complete RP 30 / 55 MC: 2 BSCG 17 / 51 MC: 1 ASCG 35 / 38 MC: 3
Location: comp(18136..19611)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphae similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 491.0
  • Bit_score: 909
  • Evalue 1.90e-261
tRNA-splicing ligase RtcB n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF19_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 491.0
  • Bit_score: 910
  • Evalue 6.20e-262
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 491.0
  • Bit_score: 909
  • Evalue 3.90e-262
  • rbh

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Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 1476
TTGAGCGAGCTTGTCACTAGGAGCGGCAGCCATAAAGTCAGGAAGGTAAGCGATCTAGAATACCGCATAGACCAAAACTCTACTAGAGGAATGAAGGTTCCAGTAACGATCTACGCTAACGAGTCTTTGATATCAAAAATGGTAACGGACAGGACAATTGACCAGGCTGCAAATGTCGCTACGCTGCCGGGCGTCATGAAACATGTCGTCGTGCTACCAGACGGCCACGAGGGCTATGGCTTTCCAGTCGGCGGAGTCGCAGCAACTGACATTGAGGAAGGGGTCATCAGCCCTGGCGGCGTGGGCTACGACATCAATTGTGGCGTCAGGCTTATGCGTACGAACCTGAAAGAAAGCGATTTGCGGCCGCGGCTGAAAGATCTTGTTAACGAGCTTTTCAAGTCAATCCCCTCCGGTGTCGGGAGCGAGGGCACAATAAGACTGACTAGGCCAGAGCTCGATGAGCTCTTGGTCGAAGGAGTAGGATGGGCCGTCAGGCACGGCTACGGAACAGAAGACGACGCAGACGTCTGCGAAGAGGGAGGCATGATGGCGGGGGCAGACCCTGCGAATGTTTCGGACACTGCGAGAAAAAGAGGGGCGTCTCAACTTGGATCATTGGGGTCGGGCAACCATTTTCTCGAAGTGCAAAAGGTTGACGGGATTTTCGACGAGCGGGCCGCAAAGGCGATGGGCATCAACCAGGTCGGGCAATTGACTGTCTTGATACACTGCGGCTCGCGGGGCTTTGGTCACCAAATATGCACCGACTATCTGCGCGTTTCTGAATCTGCACTACGAAAATACGGACTGACGCTTGCAGATCGGGAACTTGCATGTGTTCCAAACAATTCGAAGGAAGGCGAGTACTACCGCAAGGCAATGTATTCCGCGCTCAACTTTGCGTGGGCAAACAGGCAAATGATTACCCACTGGACCCGTAAGACTTTCGAGCGCGTCTTTAAGTCCCGCGAGGGCGGCCTTGAGATGGATCTTGTTTACGATGTGGCACACAATATTGCCAAGGTCGAGCGCCATAGGATCGACGGCGAGGGCAGCCGCGACGTGGTTGTGCACAGAAAAGGTGCTACCCGGGCGTTCCCGGCAGGAATGGAACAAGTGCCGGGCAAATACCGCAGCATAGGCCAGCCAGTGATAATCCCGGGCTCGATGGGGACTGCGAGCTGGATCCTGCTTGGCGGCCAAAAGTCCCTTGACCTCAGCTTTGGCTCGACTGCGCACGGCGCCGGCAGGACGATGTCAAGGTCTGCCGCAAGGCGAAACTACACTGCGGAAGGCGTGAAAAGCGGATTAGATTCAAAGGGCATATACGTCAGGGCACTGACTAGAGAAGGCGTCGTCGAGGAGACGCCTGAAGCTTACAAGGACGTCGACGCAGTCGCCAACGTATCACATTCGCTTGGTATAGCCACTAAGGTCGTAAGGCTCGTACCAATAGGGGTGATAAAGGGCTGA
PROTEIN sequence
Length: 492
LSELVTRSGSHKVRKVSDLEYRIDQNSTRGMKVPVTIYANESLISKMVTDRTIDQAANVATLPGVMKHVVVLPDGHEGYGFPVGGVAATDIEEGVISPGGVGYDINCGVRLMRTNLKESDLRPRLKDLVNELFKSIPSGVGSEGTIRLTRPELDELLVEGVGWAVRHGYGTEDDADVCEEGGMMAGADPANVSDTARKRGASQLGSLGSGNHFLEVQKVDGIFDERAAKAMGINQVGQLTVLIHCGSRGFGHQICTDYLRVSESALRKYGLTLADRELACVPNNSKEGEYYRKAMYSALNFAWANRQMITHWTRKTFERVFKSREGGLEMDLVYDVAHNIAKVERHRIDGEGSRDVVVHRKGATRAFPAGMEQVPGKYRSIGQPVIIPGSMGTASWILLGGQKSLDLSFGSTAHGAGRTMSRSAARRNYTAEGVKSGLDSKGIYVRALTREGVVEETPEAYKDVDAVANVSHSLGIATKVVRLVPIGVIKG*