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13_1_40cm_3_scaffold_8176_4

Organism: 13_1_40CM_3_Thaumarchaeota_50_5

near complete RP 30 / 55 MC: 2 BSCG 17 / 51 MC: 1 ASCG 35 / 38 MC: 3
Location: 4797..5480

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase subunit A (EC:2.7.7.6) Tax=RBG_16_Archaea_50_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 226.0
  • Bit_score: 337
  • Evalue 1.80e-89
rpoA; DNA-directed RNA polymerase subunit A (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 227.0
  • Bit_score: 255
  • Evalue 1.80e-65
DNA-directed RNA polymerase n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IC33_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 224.0
  • Bit_score: 254
  • Evalue 8.50e-65

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Taxonomy

RBG_16_Archaea_50_20_curated → Archaea

Sequences

DNA sequence
Length: 684
ATGGCGCTTGCAACCGTAGACGAGACAGCCAAGGTCATACAGAGCATACGCTTCACACTTCTATCTCCAACAGAGCTGAGAAAGATATCAGCCGTAGAGGTACAGGCTGCAGACACCTATGACGAGGATGGAGTGCCTATCGTCTCAGGCTTAATGGACGGCAGACTCGGAACTCTAGAGCCACGGCAAAAGTGCAAGACGTGTGGAAACACAGCCTCCGCATGTCCCGGCCATTTTGGACACATCGAACTCTCTGAACCCGTAATTCACGTCAGCTTCGCAAAGCTAACACACCGACTCTTATCCATTACATGTCGGAACTGTGGAAGAATCCTACTCACGGAAGAAAAGATCGAGAAATACCGAGCCAGATATACAGAGTTGAAAGAGCGACTCAACACTGTACCCGACGCGTTTCTAGACGAGATCATTAGAGACGCGAAGAAGACCCAACAGTGCCCACACTGCAGCCAAAAACAGTATCCTATCGAGCATGGAAAACCGACAACATTCCACGAGATCGTTGCGGAAGGCGGAGCAGTCCGCCTAACTCCCAGCACAATTCGAGAGCGGCTGGAGAGGATAGCCGACGATGACCTCATCCTCTTGGGCTTGGACCCGAAGGCCGCGCGGCCGGAGTGGGCTGTCCTTCAAGTAATGCCTGTCCCGCCCGTCTCAGTCAGA
PROTEIN sequence
Length: 228
MALATVDETAKVIQSIRFTLLSPTELRKISAVEVQAADTYDEDGVPIVSGLMDGRLGTLEPRQKCKTCGNTASACPGHFGHIELSEPVIHVSFAKLTHRLLSITCRNCGRILLTEEKIEKYRARYTELKERLNTVPDAFLDEIIRDAKKTQQCPHCSQKQYPIEHGKPTTFHEIVAEGGAVRLTPSTIRERLERIADDDLILLGLDPKAARPEWAVLQVMPVPPVSVR