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13_1_40cm_3_scaffold_236524_1

Organism: 13_1_40CM_3_Firmicutes_65_11

partial RP 27 / 55 MC: 5 BSCG 29 / 51 MC: 5 ASCG 6 / 38 MC: 1
Location: 2..631

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CXH1_HALOH similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 209.0
  • Bit_score: 351
  • Evalue 8.00e-94
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 209.0
  • Bit_score: 351
  • Evalue 2.30e-94
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothri similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 209.0
  • Bit_score: 351
  • Evalue 1.10e-93

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Taxonomy

Halothermothrix orenii → Halothermothrix → Halanaerobiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 630
CTCATCCAGGAAGGCAACATGGGCCTGATCCGGGCGGTCGAGAAGTTCGACTACCACAAGGGCTACAAGTTCTCGACCTACGCCACGTGGTGGATCCGGCAGGCCATCACCCGCGCCATCGCCGACCAGGCGCGGACGATCCGCATCCCGGTGCACATGGTCGAGACGATCAACAAGCTGGTCCGCGTATCGCGCCGGCTGCTCCAGGAGCTGGGCCGCGAGCCGAGTGACGAGGAGATCGGCGAGGAGATGGGGATCACTCCCGAGAAGGTTCGCGAGATCGTGAAGGTCTCCCAGGACCCTGTCTCGCTAGAGACCCCGATCGGTGAGGAGGAGGATTCGCACCTCGGCGACTTCGTAGAGGACCGCGAGGCCGTCTCGCCGTCCGACGCCGCCTCCCTGACGATGCTTCACTCGGAGGTCGAGGATGTCCTCGACACCCTCACGCCGCGCGAGCGCCGCGTGCTGCAGCTTCGCTTCGGGCTGATCGACGGCCACCAGCGGACCCTCGAAGAGGTGGGCAAGCGCTTCGGCGTCACGCGCGAGCGCATCCGCCAGATCGAGGCCAAGGCGCTGCGCAAGCTGCGCCACCCTTCGCGCTCGAAGAAGCTCCGGGACTACCTGGAGTAA
PROTEIN sequence
Length: 210
LIQEGNMGLIRAVEKFDYHKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVRVSRRLLQELGREPSDEEIGEEMGITPEKVREIVKVSQDPVSLETPIGEEEDSHLGDFVEDREAVSPSDAASLTMLHSEVEDVLDTLTPRERRVLQLRFGLIDGHQRTLEEVGKRFGVTRERIRQIEAKALRKLRHPSRSKKLRDYLE*