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13_1_40cm_3_scaffold_39626_2

Organism: 13_1_40CM_3_Firmicutes_65_11

partial RP 27 / 55 MC: 5 BSCG 29 / 51 MC: 5 ASCG 6 / 38 MC: 1
Location: comp(1021..1449)

Top 3 Functional Annotations

Value Algorithm Source
RNA binding S1 domain protein n=2 Tax=Paenibacillus RepID=D3E766_GEOS4 similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 155.0
  • Bit_score: 133
  • Evalue 1.40e-28
RNA-binding S1 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 158.0
  • Bit_score: 133
  • Evalue 3.90e-29
S1 RNA binding domain protein {ECO:0000313|EMBL:EGG36108.1}; TaxID=908341 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 158.0
  • Bit_score: 133
  • Evalue 1.90e-28

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Taxonomy

Paenibacillus sp. HGF5 → Paenibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 429
GTGACGCCTGGGACGGTAGTTGAAGGGACGGTCGTCGGGATAACGAACTTCGGGGCATTCGTACAGATCGAGGGATCGGGGACAGGACTGGTTCATATTTCTGAGATCGCGAACGAGTACGTTCGCGATGTCAACAACCACGTGAAGATGAACGACAAGGTCAAAGTCAAGGTCCTCAACGTGGACGTGACCAACGGGAAGATGGATCTGTCGTTGAAGCAGGCGGCCGTGCCGGACGGTCCAGTCGGAATGTCCGCACCCGTCCTGCCGCGCTCGTACCGCCGCGGCGGCCGGGGAAAGCGCGAGCTGCCGGAGGGCGCCGACCCGGTCTTCGAGGAGAAGCTCTCCAAGTTTTTGAAGACCAGCGAAGAGCGCCTGCTCGACATCAAGCGGAATATCGAAGCCAAGCGAGGCGGCCGCTTCAAGTAG
PROTEIN sequence
Length: 143
VTPGTVVEGTVVGITNFGAFVQIEGSGTGLVHISEIANEYVRDVNNHVKMNDKVKVKVLNVDVTNGKMDLSLKQAAVPDGPVGMSAPVLPRSYRRGGRGKRELPEGADPVFEEKLSKFLKTSEERLLDIKRNIEAKRGGRFK*