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13_1_20cm_full_scaffold_19350_9

Organism: 13_1_20CM_Gemmatimonadetes_69_52_partial

partial RP 18 / 55 MC: 1 BSCG 19 / 51 MC: 1 ASCG 1 / 38 MC: 1
Location: comp(7821..8252)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A692_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 143.0
  • Bit_score: 237
  • Evalue 1.10e-59
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 143.0
  • Bit_score: 247
  • Evalue 9.20e-63
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 143.0
  • Bit_score: 237
  • Evalue 3.30e-60

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 432
CTGCGGCAGACGCTGCGGCGCGAGCCCACGCCGGAGGAGATCTCCGACGCGACCAAGCTGTCGCTCGAGGTGGTGCAGTCGCTCGCCGCGCTCAACACGGGCGACGTGCGGCTCGATGCCCCGCTCGACCCCGACGGCGACCGCTCGCTGATCGAGCGATTCATCGCCGAGGATCTCCCCGACACGGAAGACCAGGCGATGGACCGGTTCCTGTCGGACGAGATCGAGCAGGCGTTGAACACGTTGCAGCGGCGCGACGCCAAGGTGTTGCGCCTGTACTTCGGCCTGGACGGCGGCCGGGAGCACACGCTCGAGGAGATCGGCGGGATGCTGGGCGTGACGCGCGAGCGGGTGCGCCAGCTGCGGGACCGGGCGCTCAAGCGGCTGCGGGATGGCGAGGTGGGAAAGGCGCTCGCGAGCTTCGCGGCGTAA
PROTEIN sequence
Length: 144
LRQTLRREPTPEEISDATKLSLEVVQSLAALNTGDVRLDAPLDPDGDRSLIERFIAEDLPDTEDQAMDRFLSDEIEQALNTLQRRDAKVLRLYFGLDGGREHTLEEIGGMLGVTRERVRQLRDRALKRLRDGEVGKALASFAA*