ggKbase home page

13_1_20cm_full_scaffold_228710_1

Organism: 13_1_20CM_Gemmatimonadetes_69_52_partial

partial RP 18 / 55 MC: 1 BSCG 19 / 51 MC: 1 ASCG 1 / 38 MC: 1
Location: comp(3..542)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL6_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 177.0
  • Bit_score: 240
  • Evalue 1.70e-60
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 177.0
  • Bit_score: 261
  • Evalue 1.00e-66
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 177.0
  • Bit_score: 240
  • Evalue 4.80e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 540
ATGTCGCGCATCGGCAGGAAGCCGGTCCCCATGCCCAAGGGCGTGACCGCCCAGCTCGACGGGCTGCGCATCACCGTGAAGGGTCCGAAGGGCGAAATCAGCCGGTTGGTTCACGCCGAGCTGGCGGTGGCGGTGGAGGGCGAGACGATCGTCGTACGACGGCCGTCCGACGAGAACCGCCACAAGGCGCTCCACGGACTCACGCGCACGCTCGTCGCCAACATGGTGGACGGCGTGACCAAGGGGTTCGCGAAGGCGCTCGAGATCCAAGGCGTGGGCTATAAGGCGGAACCGAAGCCGTTCGGCGTGCAGCTCGTCGTCGGGTTCTCCCATCCGGTGCCGTACCACGCGCCACAAGGGATCAAGATCTCGGTCGACAACAACGTCCTCGTGAAGATCGAAGGCGTGGACAAGGAGCTCGTGGGCCAGGTGGCGGCAGAGATCCGCGCGATCCGGCCACCCGAGCCCTACAAAGGCAAGGGGATCCGCTACGTGGGCGAGCAGGTCCGGCGCAAGGCCGGCAAGACCGCCCAGGCGGCC
PROTEIN sequence
Length: 180
MSRIGRKPVPMPKGVTAQLDGLRITVKGPKGEISRLVHAELAVAVEGETIVVRRPSDENRHKALHGLTRTLVANMVDGVTKGFAKALEIQGVGYKAEPKPFGVQLVVGFSHPVPYHAPQGIKISVDNNVLVKIEGVDKELVGQVAAEIRAIRPPEPYKGKGIRYVGEQVRRKAGKTAQAA