ggKbase home page

13_1_20cm_full_scaffold_24642_2

Organism: 13_1_20CM_Gemmatimonadetes_69_52_partial

partial RP 18 / 55 MC: 1 BSCG 19 / 51 MC: 1 ASCG 1 / 38 MC: 1
Location: 2043..3041

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A692_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 291.0
  • Bit_score: 467
  • Evalue 1.20e-128
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 297.0
  • Bit_score: 483
  • Evalue 3.00e-133
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 291.0
  • Bit_score: 467
  • Evalue 3.40e-129

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 999
ATGCCTAAGCACATCCGACGGAAGAAGACCACCTCCCCCGCCCGGGCGAAGCCGCGAACGGCTCCCCGCCCGACGGCGGCGGCCGCCGTGTCGGCGCCCGCGGCCAAGGCGAAGCCCGCCAAGAAGCGCGGGCGGCGCCGGGGGCTGTTGGCCGGGCTCGGCACCCACGAGCACGAGCGCGACATCCTCGACCAGTATCTGCACGAGGTATCGAAGACGCCCCTCCTCACGCAGAAGGAGGAGATCGCGCTCGCCCGCAAGGTGCGCGCCGGGGATCAGGAGTCGATGCAGGAGCTCGTGAAGCGCAATCTCCGCTTCGTGATCTCGGTCGCCAAGAAGTACCAGAACCGCGGGCTGCCCCTCACCGACCTGATCGGCGAGGGGAACGTCGGGCTGCTCACCGCGGCCCGGAAATTCGACCCGGACCAGGGGGTGAAGTTCATCTCCTATGCGGTGTGGTGGATCCGGCAGGCGATCCTCGCGGCGCTCGCGCGCCAGGGGCGCACCGTGCGCGTGCCCTTGAACCGCACCGCCGACCTGTCGCGCATCGTGCGCACGGCCGAGTACCTGCGGCAGACGCTGCGGCGCGAGCCCACGCCGGAGGAGATCTCCGATGCCACCAAGCTGTCGCTCGAAGTCGTGCAGTCCCTCGCGGCACTCAACACGGGGGACGTGCGGCTCGATGCGCCGCTCGATCCGGACGGCGATCGCTCGTTGATCGAGCGGTTCATCGCCGAAGACCTCCCCGACACGGAAGACCAGGCGATGGACCGCTTCCTGTCGGACGAGATCGAGCAGGCGCTGGGCACGCTGCAGCGGCGCGACGCCAAGGTGCTGCGCCTGTATTTCGGCCTGGACGGCGGCCGCGAGCACACGCTCGAGGAGATCGGCGGCATGCTCGGCGTAACGCGCGAGCGGGTGCGGCAGCTGCGGGATCGGGCCCTGAAGCGCCTGCGGGACGGCGAGGTAGGCAAGGCGCTGGCGAGCTTCGCGGCATAG
PROTEIN sequence
Length: 333
MPKHIRRKKTTSPARAKPRTAPRPTAAAAVSAPAAKAKPAKKRGRRRGLLAGLGTHEHERDILDQYLHEVSKTPLLTQKEEIALARKVRAGDQESMQELVKRNLRFVISVAKKYQNRGLPLTDLIGEGNVGLLTAARKFDPDQGVKFISYAVWWIRQAILAALARQGRTVRVPLNRTADLSRIVRTAEYLRQTLRREPTPEEISDATKLSLEVVQSLAALNTGDVRLDAPLDPDGDRSLIERFIAEDLPDTEDQAMDRFLSDEIEQALGTLQRRDAKVLRLYFGLDGGREHTLEEIGGMLGVTRERVRQLRDRALKRLRDGEVGKALASFAA*