ggKbase home page

13_1_20cm_2_scaffold_203329_curated_1

Organism: 13_1_20CM_2_Archaea_63_93_curated

partial RP 1 / 55 BSCG 2 / 51 ASCG 0 / 38
Location: comp(68..1048)

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D304_METSW similarity UNIREF
DB: UNIREF100
  • Identity: 40.3
  • Coverage: 315.0
  • Bit_score: 216
  • Evalue 2.80e-53
Transcription initiation factor IIB similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 315.0
  • Bit_score: 216
  • Evalue 8.00e-54
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 178.0
  • Bit_score: 268
  • Evalue 8.70e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Euryarchaeota_69_17_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 981
ATGAGCCAGTTTACATCGACGAACGCAAGCGACGTGAGATTCAAGCGGGAGCTCCAGCCCGATTCATCGGGTTCGGATCCCGCCCGCTGCCCGAACTGTGGCAGCTTCGCCCTCTACGTCGATCCGGTTCGCGGCGAGCGCGTGTGCGACAACTGCGGCTTCGTGGTCGACGAGAGCCTCGTGGATCAGGGCCCCGACTGGACCACGTTCGAAGGCGATGATCGGATCCGGGCGGGTCCTCCGCCGTCCGTGATGGCGCCGGACAAAGGGCTCGGGTCTATGGTCGGAAACGGCCTACGGGATGCGAAGGGGAATCCGATCGACGCACGCAGCGTGGCGGCTCTGAACCGCCTGCGCCGGGTCAGCCAATGGACTCGGTACGACCGGACCGAACGCGCCTTGGCCCCCGGCCTAGCGCAGTTGTCCAGCCTCTCGTCCCGCCTGGGCCTCGCCCCCGCGTTCCGGGAGCGTGCCGCGATCATCTTGCGGAAGGCGATCGAGGCGGGTCTCTCCCGTGGTCGGTCAATGGATGCGATCGTCGCGGCCGTCGTGTACCTCGCGGCAAAGCAACTCGGTGCGCCGCGCGGATTGCATGAACTCGCCGAGGCGACCGGAGTCACGGTCCACCGGATCTCGCTGACGGCGAAGGTCGTGAGCCGAGAATTGGGCGTGTTCAGCCGCGCGAGTCGCGCAGAGGACTTCGTTCCCCGGTTCGCGTCGCAGCTCGGCCTCGATGCGCGGGTCGGAGAGCGGTCGCTCGCCCTCGTCTCGCAAGTCAAAGACTCGAAGGTCCTCGAGGCGAACTCGCCGGTCGGCATTGCGGCGGGGGCGCTCTATCTGGCCTCGGAGGAAGTGGGCGTGCCGTTGACGCAAGCCCAGATCGCGCGCCTGACGGGCGTCAGCGAGGTCACCATCCGAAAACACTATCGCCTACTGAAGGAATCCCTGACAGAGAAGGAGACGCCATTGGAGGCGGCTTGA
PROTEIN sequence
Length: 327
MSQFTSTNASDVRFKRELQPDSSGSDPARCPNCGSFALYVDPVRGERVCDNCGFVVDESLVDQGPDWTTFEGDDRIRAGPPPSVMAPDKGLGSMVGNGLRDAKGNPIDARSVAALNRLRRVSQWTRYDRTERALAPGLAQLSSLSSRLGLAPAFRERAAIILRKAIEAGLSRGRSMDAIVAAVVYLAAKQLGAPRGLHELAEATGVTVHRISLTAKVVSRELGVFSRASRAEDFVPRFASQLGLDARVGERSLALVSQVKDSKVLEANSPVGIAAGALYLASEEVGVPLTQAQIARLTGVSEVTIRKHYRLLKESLTEKETPLEAA*