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A1-16-all-fractions_k255_4472309_3

Organism: A1-16-all-fractions_metab_12

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Location: comp(1758..2021)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-E factor n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V2S8_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 82.0
  • Bit_score: 70
  • Evalue 8.70e-10
RNA polymerase sigma24 factor {ECO:0000313|EMBL:ETK34949.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 76.0
  • Bit_score: 78
  • Evalue 4.50e-12
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 69.0
  • Bit_score: 69
  • Evalue 4.20e-10

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 264
GTGGTTCCCGACGCTCCGCCGGACGGGGCCAGTGACGGCTACCTGGACAGCGTCGTTGACAGGAACCTGATGACGAAAGTGCTGCGGCTACCGGACAGGCAGCGGCAAGTTGTCGCGCTGCGGCTGTTCCTGGACTTGGACACTGCCCAGACCGCCGACGTTCTCGGCATCGCGGCAGGCACGGTCACCGCACACCTCGCCCGCGCGATCGCGACGCTGCGCCAAGACCTCTCCAATGGAATGGGGCTAGAGGAAAAGATATGA
PROTEIN sequence
Length: 88
VVPDAPPDGASDGYLDSVVDRNLMTKVLRLPDRQRQVVALRLFLDLDTAQTADVLGIAAGTVTAHLARAIATLRQDLSNGMGLEEKI*