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A1-16-all-fractions_k255_2062607_1

Organism: A1-16-all-fractions_metab_12

partial RP 38 / 55 MC: 8 BSCG 37 / 51 MC: 13 ASCG 10 / 38 MC: 1
Location: comp(3..1469)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 498.0
  • Bit_score: 560
  • Evalue 1.70e-156
transcription-repair coupling factor n=1 Tax=Nocardiopsis baichengensis RepID=UPI0003491AC7 similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 498.0
  • Bit_score: 573
  • Evalue 1.80e-160
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 489.0
  • Bit_score: 556
  • Evalue 6.40e-156

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Taxonomy

Streptomonospora alba → Streptomonospora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1467
ATGAGCCTCGCCGGACTACTCGCCGCCGTAGCCGAAGATCCCCAGCTCCGTACCGCCCTTGCCGGCCAGCCAGGCTCGCACGAGGTCGATGCCGCCGCAGAGCGCGATCTCGTCGCACCTGCCGCGCTGCGCCCTGTCATCACCGCCGCGATGGCGACGGGTGCGGCCGGCGGGCAGGGCCGGTTCGTGCTCGCGGTGACCGCCACCGCGCGGGAGGCCGAGGACCTGACGGCGGCGCTCGGCTCGTTCCTGCCGCCGCACACGGTCGCCACGTTCCCGGGCTGGGAGACGCTGCCGCACGAGCGGCTCTCTCCCCGCTCGGACACCGTCGGCCAGCGGATCGCGGTCCTGCGCCGCCTCCAGCACCCCGGCCCCCCCGGGGAAGGCATTGCCGGTCCGCTCTCGGTTGTCGTAGCGCCGGTCCGTGCCGTGCTGCAGCCGATCGTCGCGGGCCTTGGCGACCTGGTGCCCGTACGGCTCGCCGCAGGCGACGACGCGGACCCGGATGACGTGCTCGCGCGGCTCGTCGACATCGGGTACGCCCGCGTCGAGATGGTGTCCAAGCGCGGTGAGCTCGCGGTGCGCGGCGGGCTGCTCGACGTGTTCCCGCCGACCGAGGAGCATCCGCTTCGCGTCGAGTTCTTCGGCGACACCGTCGAGGAGATCCGCGTGTTCAAGGTCGCCGACCAGCGCTCGGCCGGCCAGGCGGAGCACGGCCTATGGGCGCCGCCCTGCCGCGAGCTGCTGCTCACCCCTTCGGTGCGGGCCCGCGCCAAGGAACTGTCCGCCAAGCATCCCGCCGTGTCTGAGATCCTCGGCAAGATCGCCGACGGGATCACCGTGGAGGGCATGGAGGCGTTTTCCTCCGTCCTCGCGGACCATATGGACCTGCTGCTCGACCACCTTCCGCTCGGCGCCGTCCTGCTCGCCTGCGACCCCGAGCGGATCAGGACCAGGGCGATCGAACTGGTGACGACAAGCCAGGAGTTCCTCGAGGCGTCCTGGGCGAGCGCGGCGTCCGGCGCCGAGGCGCCCGTCGACCTTGGCGGCTCGGCCTTCCAGCCGATAGAGAAGATCCGCGAGGCCGCGGCCGAACTCGGCATCGCGTGGTGGACACTCGCCCCCTTCGGGGTCACCGAGGAGAGCGCAGAACCGCCCGGTGAGCAATCGGCGGACGACAGTAGCCCGCGGCCGTTCGGGATGATCATCAATGCGCAGCCCGCGACGGCCTACCGCGGCGAGACCGGCCGCATGATCGCGGACGTGCGCCGGTGGCTCGCCGACGGGTGGCGGGTGGTGCTCGTCACCGAGGGGCACGGGCCGGCCAAGCGGCTCGCCGAGGTGCTGCGGGGCGAGGGGTTCGGCGCGCGGACCGGCGACATCGACGCCGAGCCGGAAGCCGGAGTCCCCTACGTGGCCACCGGAGAGCTGCGCCAGGGGTTCGCGTGGCCGGCCGTCCGGCTCGCG
PROTEIN sequence
Length: 489
MSLAGLLAAVAEDPQLRTALAGQPGSHEVDAAAERDLVAPAALRPVITAAMATGAAGGQGRFVLAVTATAREAEDLTAALGSFLPPHTVATFPGWETLPHERLSPRSDTVGQRIAVLRRLQHPGPPGEGIAGPLSVVVAPVRAVLQPIVAGLGDLVPVRLAAGDDADPDDVLARLVDIGYARVEMVSKRGELAVRGGLLDVFPPTEEHPLRVEFFGDTVEEIRVFKVADQRSAGQAEHGLWAPPCRELLLTPSVRARAKELSAKHPAVSEILGKIADGITVEGMEAFSSVLADHMDLLLDHLPLGAVLLACDPERIRTRAIELVTTSQEFLEASWASAASGAEAPVDLGGSAFQPIEKIREAAAELGIAWWTLAPFGVTEESAEPPGEQSADDSSPRPFGMIINAQPATAYRGETGRMIADVRRWLADGWRVVLVTEGHGPAKRLAEVLRGEGFGARTGDIDAEPEAGVPYVATGELRQGFAWPAVRLA