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A1-18-all-fractions_k255_151314_4

Organism: A1-18-all-fractions_metab_conc_42

partial RP 36 / 55 MC: 4 BSCG 37 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(1440..2153)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Microvirga sp. WSM3557 RepID=I4YKK2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 197.0
  • Bit_score: 180
  • Evalue 1.20e-42
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 197.0
  • Bit_score: 180
  • Evalue 1.70e-42
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 185.0
  • Bit_score: 171
  • Evalue 2.80e-40

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
GTGCTCCGCCGCACCTGCGGATTGTGGGTGCAATCACCGTCGAGGCATGAGCATGGGATTAGCCGTGAGCTCGTGAACACGACCGCATCTCGTGGGTTCACACCCCGCCTTCTGATCGGCAAGCGCGCCGCGCCCGCCCCGGCTGCGGCGGCTGCGCAGGTTCATGAATTCAACCGGGTGATCCTCCCTCACCTCGATGGTGCCTACAATCTTGCGCGGTACCTCACTCGGGACCCGGTGCTCAGCGACGACGTGGTCCAGGATGCAGTTCTTCGCGCCTTCCGCGCCTTTGCACAGTTCCGCGGCGGCTCGCCTCGAGCTTGGCTGCTTACCATCGTGCGCAACTGCTGCCGGACTGCGCAGGCGGGTAGAGGCGGCGCGGTATCGCTGGTGATCCACGAAAGCAGTCTTAGCGAAGAGGCCGCCGCGGAGCTCGCCAGCCACCAAGATCCGGCGCCGAGCCCCGAGGAAGAGGTCTTTCGCAAGGCGGAAATCGGCCGGGTGAGACAAGCGATTGAAGCGATACCGGAGCCTTTTCGCGAAGCTATCGTGCTTCGGGAATTGGAGGACCTCTCTTATGCGGAGATTGCCGAGGTCACCGGCGTCCCGATCGGAACAGTGATGTCGCGATTGGCGCGCGGGAGATCCATGCTTGCCAAGGAACTGCTTCCGCCCGCGAGTGTCGCCTCTGAGGAATCAAGGAGTGTGAAGTAG
PROTEIN sequence
Length: 238
VLRRTCGLWVQSPSRHEHGISRELVNTTASRGFTPRLLIGKRAAPAPAAAAAQVHEFNRVILPHLDGAYNLARYLTRDPVLSDDVVQDAVLRAFRAFAQFRGGSPRAWLLTIVRNCCRTAQAGRGGAVSLVIHESSLSEEAAAELASHQDPAPSPEEEVFRKAEIGRVRQAIEAIPEPFREAIVLRELEDLSYAEIAEVTGVPIGTVMSRLARGRSMLAKELLPPASVASEESRSVK*