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A1-18-all-fractions_k255_1013110_3

Organism: A1-18-all-fractions_metab_conc_42

partial RP 36 / 55 MC: 4 BSCG 37 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 3812..4345

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 178.0
  • Bit_score: 174
  • Evalue 9.30e-41
2''''-5'''' RNA ligase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C775 similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 176.0
  • Bit_score: 175
  • Evalue 3.90e-41
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 176.0
  • Bit_score: 171
  • Evalue 1.20e-40

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Taxonomy

Sphingomonas changbaiensis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGCACCGTCTGTTCGTTGCCATCCGTCCGCCAGAGATGATCCGCGACCTGCTGATCGATGCCATGGACGATACGCCAGACTTCCGCTGGCAGGATGAGGCGCAGCTGCACCTCACACTGCGCTTTATCGGCGAAGTCGACCGACCAATGGCCAACGACCTTGCTGACGCTCTTTCGACTGTCCGTGGGGATAGGTTCGAGCTGCAGATCGCCGGTGTCGGTCGCTTCGAACAGCGCAACAGCGGCGCACTATGGGCGGGCGTAGAGCCCAAAGCATCGGTCGCTGCCCTTGCCGCGAAAGTCGAGCGACAGTGCCAGAAGGTCGGGCTGGCATCCGAACGCCGTGCCTTTCATCCCCACATCACGCTAGCACGGTGGAAAGGGCGTCGTACGCGCGAGCTGCGCGACTTCCTCGAGCGCAACAGCGGCCTGTCGTCTGCCCCATTCGAGGTAAGCGAATTCCTCCTTTTCGAAAGCCGTTTGTCGCGCCACGGGGCGCACTATGAAGAAGTTGAGACTTATGAGCTTGGCTAA
PROTEIN sequence
Length: 178
MHRLFVAIRPPEMIRDLLIDAMDDTPDFRWQDEAQLHLTLRFIGEVDRPMANDLADALSTVRGDRFELQIAGVGRFEQRNSGALWAGVEPKASVAALAAKVERQCQKVGLASERRAFHPHITLARWKGRRTRELRDFLERNSGLSSAPFEVSEFLLFESRLSRHGAHYEEVETYELG*