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A3-16-all-fractions_k255_3106956_1

Organism: A3-16-all-fractions_metab_conc_15

partial RP 23 / 55 BSCG 22 / 51 MC: 2 ASCG 8 / 38 MC: 3
Location: comp(2..2989)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 996.0
  • Bit_score: 1887
  • Evalue 0.0
mfd; transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 83.5
  • Coverage: 996.0
  • Bit_score: 1672
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D7C8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 996.0
  • Bit_score: 1762
  • Evalue 0.0

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Taxonomy

Massilia sp. JS1662 → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2988
ATGCCCTTCGACCTCACCCGCCATCTCCCCAAACCCGGAACCCGTTTCGCCGTGCCCCAGCTGCACGGATCGGCCGATGCCTATGCGCTCGCCGTCGCCGCCCTCGCGCTGAAAGCCAGGAAGCAGATGCTCACCGTGATCGTCGCGAACGCCAGCGACGGCCAGCGCCTGCTCGACGAAATACCCTGGTTCGCGGAAGGCAAGCTGTCCTGCCACCTGCTGCCGGACTGGGAAACGCTCCCGTATGACGCGTTCTCGCCGCACCAGGATCTCGTCTCGGAACGCCTGGCCACGCTGCACGAGATCCGCAACGGCCAGTGCGACGTGCTCGTCGTGCCCGCGACGACGGCCCTCGTGCGCCTCGCGCCGCCGTCGTTCCTGGCCGCCTACACGTTCTTCTTCCGCCAGGGCGAGAGCCTCGACGAAGCGAAACTGAAGGCCCAGTTGACGCTCGCCGGCTATACGCACGTGACGCAGGTGATGTCGCCGGGCGAATACTCCGTGCGCGGCGGGCTGATCGACCTGTTCCCGATGGGCTCCGCGCTGCCCTACCGCCTGGACCTGTTCGGCGACGAGATCGAAACGATCCGCACCTTCGACGCCGACACCCAGCGCTCGCTGTACCCCGTCAAGGAAGTGCGCCTGCTGCCGGGCCGCGAATTCCCGATGGACGAAGCGTCGCGCACCGCGTTCCGCGGCCGCTGGCGCGAACGCTTCGAGGGCGATCCGTCCCGTTCGACGATCTACCGCGACATCGGCAACGGCATCGCGTCGGCCGGCATCGAATACTACCTGCCGCTGTTCTTCGACCAGACGGCCACCCTGTTCGACTACCTGCCGGACGATGCGAGCCTCGCCCTCGTCGGCGACATCGAATCCGCGATCCAGCGCTTCTGGACGGACACGGAGTCGCGCTACAAATTCCTCAGGACCGACCGCGACCGCCCGCTCCTCGAACCGAAGGAGATCTTCCTCGGCACCGAGGATTTCTTCGTGCAGGCCAAGCCGCACGGACGCTGGACGATCGCCCGCGATGCAAATGCGGGTGCTTCGGAACTGTCCGCGCCGATCCCCGACATCGCCGTCAACCGCCGCCTCGACGATCCGCTCGCGAACCTGCGCTCGTTCCTGATGGAGGCCGCCGGCAAGCGCGTGATGATCTGCGCCGAATCCGCCGGCCGGCGCGAGACCTTGCAGCAGTACTTCAACGAGTACAAGCTGGACCTCGCCCTGATCGAGGGTTTCGACGGCCTGCGCGCGACGGATGCGAAGGTCGTGCTGGGTGTCGCGCCGCTGCAGGCCGGCTTCGAGCTGATGGAAGAAGGCGCCGGCCACCTCGTGTTCATCACGGAGACCGAGCTGTACGCGGGCACCGGCCGGCGCGCGGGCAAGAAGAAGCAGGAAGCCGGCTCGCAGGTCGAGTCGATGGTGCGCGACCTCTCGGAGCTGAAGATCGGCGATCCGGTCGTGCACATCAACCACGGCATCGGCCGCTACATGGGCCTGATGAGCATGGACCTGGGCGAAGGCGAGACGGAATTCCTGCACCTCGAATACGCCAAGGAGACCAAGCTCTACGTCCCGGTCTCGCAACTGCACGTGATCTCGCGCTATTCCGGCGCCTCGCCGGAAGACGCGCCGCTGCACACGCTCGGCTCCGGCCAGTGGGACAAGGCCAAGAGAAAGGCTGCGGAACAGGTGCGCGACACCGCAGCCGAACTCCTGAACCTGTATGCGCGCCGCGCCGCGCGCAAGGGCCATTCGTTCGAATACTCGGCCACCGACTACGAGAACTTCGTGCAGAGCTTCGGCTTCGACGAGACGCCGGACCAGCGCGCCGCCATCGCTGCCGTCATGCAGGACATGACATCGGGCCGGCCGATGGACCGCCTCGTATGCGGCGACGTCGGCTTCGGCAAGACGGAAGTCGCGCTGCGCGCCGCGTTCATCGCCGTCATGGGCGGCAAGCAGGTGGCGATCCTCGCGCCCACCACCTTGCTGGCGGAACAGCACGCGCAGACATTCTCCGACCGCTTTGCCGACTGGCCCGTGCGTATCGCGGAACTGTCGCGCTTCCGCACCGGCAAGGAGATCAACAACGCCATCAAGGGCATGGCCGACGGCACCGTCGACATCGTGATCGGCACCCATAAACTGCTGTCGCAGGACGTGAAGTTCACGCGCCTGGGGCTCGTCATCATCGACGAGGAACACCGCTTCGGCGTGCGCCAGAAGGAAGCGCTGAAGGCGTTGCGGGCCGAGGTCGACGTGCTGACGCTGACCGCGACGCCGATCCCGCGTACCCTCGGCATGGCGCTGGAAGGCCTGCGCGATTTTTCCGTGATCGCGACGGCGCCGCAGAAGCGCCTCGCCATCAAGACGTTCGTGCGCGGCGAGGACGGCTCCGTGATCCGCGAAGCCTGCCTGCGCGAACTGAAGCGCGGCGGCCAGATCTACTTCCTGCACAACGAAGTCGAGACGATCGAGAACCGCCTCGCGATGCTGCGCGAGCTGCTGCCGGAAGCGCGCATCGCCGTCGCCCACGGCCAGATGCACGAGCGCGACCTGGAGAAGGTCATGCGCGATTTCGTCGCCCAGCGCTACAACATCCTGCTGTGCACGACGATCATCGAGACCGGCATCGACGTGCCGACGGCGAACACGATCATCATGCACCGCGCCGACAAGTTCGGCCTCGCCCAGCTGCACCAGCTGCGCGGGCGCGTCGGCCGCTCGCACCATCAGGCCTACGCCTACCTGCTCGTGAACGACATGCACGGCCTGTCGAAACAGGCGCAGCGCCGGCTCGACGCGATCCAGCAGATGGAGGAACTGGGCAGCGGCTTCTACCTCGCGATGCACGACCTGGAGATCCGCGGCGCCGGTGAGGTGCTCGGTGAATCGCAGAGCGGCGAGATGCAGGAAGTCGGCTTCAACCTGTACTGCGCCATGCTCGATGCCGCCGTCAAATCGTTGAAGGAGGGCAAG
PROTEIN sequence
Length: 996
MPFDLTRHLPKPGTRFAVPQLHGSADAYALAVAALALKARKQMLTVIVANASDGQRLLDEIPWFAEGKLSCHLLPDWETLPYDAFSPHQDLVSERLATLHEIRNGQCDVLVVPATTALVRLAPPSFLAAYTFFFRQGESLDEAKLKAQLTLAGYTHVTQVMSPGEYSVRGGLIDLFPMGSALPYRLDLFGDEIETIRTFDADTQRSLYPVKEVRLLPGREFPMDEASRTAFRGRWRERFEGDPSRSTIYRDIGNGIASAGIEYYLPLFFDQTATLFDYLPDDASLALVGDIESAIQRFWTDTESRYKFLRTDRDRPLLEPKEIFLGTEDFFVQAKPHGRWTIARDANAGASELSAPIPDIAVNRRLDDPLANLRSFLMEAAGKRVMICAESAGRRETLQQYFNEYKLDLALIEGFDGLRATDAKVVLGVAPLQAGFELMEEGAGHLVFITETELYAGTGRRAGKKKQEAGSQVESMVRDLSELKIGDPVVHINHGIGRYMGLMSMDLGEGETEFLHLEYAKETKLYVPVSQLHVISRYSGASPEDAPLHTLGSGQWDKAKRKAAEQVRDTAAELLNLYARRAARKGHSFEYSATDYENFVQSFGFDETPDQRAAIAAVMQDMTSGRPMDRLVCGDVGFGKTEVALRAAFIAVMGGKQVAILAPTTLLAEQHAQTFSDRFADWPVRIAELSRFRTGKEINNAIKGMADGTVDIVIGTHKLLSQDVKFTRLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRGEDGSVIREACLRELKRGGQIYFLHNEVETIENRLAMLRELLPEARIAVAHGQMHERDLEKVMRDFVAQRYNILLCTTIIETGIDVPTANTIIMHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVNDMHGLSKQAQRRLDAIQQMEELGSGFYLAMHDLEIRGAGEVLGESQSGEMQEVGFNLYCAMLDAAVKSLKEGK