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A3-16-all-fractions_k255_1087319_19

Organism: A3-16-all-fractions_metab_conc_44

partial RP 34 / 55 MC: 1 BSCG 37 / 51 MC: 3 ASCG 12 / 38 MC: 2
Location: comp(16066..17079)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003748108 similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 332.0
  • Bit_score: 307
  • Evalue 9.60e-81
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 324.0
  • Bit_score: 324
  • Evalue 1.40e-85
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 333.0
  • Bit_score: 296
  • Evalue 8.20e-78

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
ATGGGTGCTGACGAGACCACCTTCCCCGCGCTCTTCGAACGGCACCGCCATGAGCTGCAGGCACACTGCTACCGCATGGTCGGGTCGTTCGACGACGCCGAGGACCTCGTGCAGGAGACGTTCGCCCGGGCATGGCGAGCGCGGGCGAACTTCCGGCGTGAGGGGCAGTGGTCTTTGCGCGCGTGGCTGTATCGGATCGCGACGAATGCGTGCCTTGATCACGTCGGCCGCCGCGCGCCGCGCCTGCTGCCGGCGGACGTCGCGCCCGCGGCCGACCCGGAGGCCGACCTGCCGCCGGTCGCCTCCGATGTCCCGTGGCTCGACCCTTATCCCGACCATCTGGTGGACCCGCACGAGGCCGCCGTCGCGCGGGAGACGCTCGAGATCGCGTTTGTGGCCGCGGTCCAGCATCTGGCCCCGCGCCAGCGGGCGACGCTGATCCTGCGCGACGCGGCCGGATTCTCGGCCCGCGAGACGGCCACGCTGCTCGGCACGAGCGTGCCGGCCGTGAACAGCGCCCTGCAGCGGGCTCGCGAGGGTCTGCGAGATCGGCTGCCCTCGCGCCGGGTCGAGTGGGCGCTCTCGGACGACTCGACGGCGGAGGCGCGCGCCGTCGCGCAGCGCTACATCGAGGCACTCGAGCGCCGCGACTTCGCGACCCTGGCCGACCTCGTCCTCGCCGACGCGCGCTTCTCCTTCCCCCCGCGCCGCGTCTGGTACGACGGCCTCGAGGCCTTTCGACGGGCCAGCGACAAGCACGCGGCGCCCGGCGAGCACCTCCTCCTTCCCGCCGCCGCCAACTTGCAGCCCGCGTTCGCCATCTACCTTCAGGCCCCGGGCGGGCGGCGCTACCGTGCGCTCGCCCTCGCTGTGCTGCGCGTGGAGGGGGGGCGCGTCGCCGAGGTCGTCCACTGGGACCGGCCGGAGCTGTTCGAGGCTTTCGGGCTACCGATGAGTTTTTCGCCCTCGCGCCGTTCCAATGAGGACGAGGTCAACGCTAAGGAGGTCCGATGA
PROTEIN sequence
Length: 338
MGADETTFPALFERHRHELQAHCYRMVGSFDDAEDLVQETFARAWRARANFRREGQWSLRAWLYRIATNACLDHVGRRAPRLLPADVAPAADPEADLPPVASDVPWLDPYPDHLVDPHEAAVARETLEIAFVAAVQHLAPRQRATLILRDAAGFSARETATLLGTSVPAVNSALQRAREGLRDRLPSRRVEWALSDDSTAEARAVAQRYIEALERRDFATLADLVLADARFSFPPRRVWYDGLEAFRRASDKHAAPGEHLLLPAAANLQPAFAIYLQAPGGRRYRALALAVLRVEGGRVAEVVHWDRPELFEAFGLPMSFSPSRRSNEDEVNAKEVR*