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H1-16-all-fractions_k255_2246557_3

Organism: H1-16-all-fractions_metab_conc_21

near complete RP 47 / 55 MC: 4 BSCG 49 / 51 MC: 8 ASCG 13 / 38 MC: 1
Location: comp(1579..2871)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.9
  • Coverage: 487.0
  • Bit_score: 261
  • Evalue 1.80e-66
Transcription termination factor Rho n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVG2_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 425.0
  • Bit_score: 253
  • Evalue 3.60e-64
rho: transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 487.0
  • Bit_score: 261
  • Evalue 3.70e-67

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Taxonomy

Rubrobacter radiotolerans → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1293
ATGGCCCTCAAAGACGAACACCTGGCGGATCTCCACCGGCGGGCCCGGGATCAGCGGGTGTCCGGCTACCGGATGATGACCCGGGACGAGCTGATTGCGGTGCTCGAGGAAGGAGTCGGAGCGGAGGAGATCGCGGAGGGCGAGCCGAGCGCGGAGGAGGCCGAGGAGCGGATCCGCGAGCCGGAGTCCGGGGGCCGCGAACCGAAGCCGGAGCGGCGCGAACCGAAGCCGGAGCGGCGCGAGCCGGAGCCTGAGCCCGATGCCGAGCCGGTCACCGGCGTCCTCGACCGCATGCCCGCGGGCTACGGATTCCTCAGGCTGAGCGGCCTGCGGGAGAGCGAGGGCGACGTCTACGTCTCCGCCTCACAGATTCGCCGCTGTGAGCTTCGCCCGGGCGACGAGGTGAGCGGGCCCGCCCGGCCGCCGCGGCGCGGCGAGCGCCACCGGGCACTGGTCCGGGTTGAGTCCGTCAACGGACAGAGCCCGGAGGGTGAGCGGACGACGTTCGAGGACATCACGCCCGCCCCTCCGCATCGCCGCCTGCTCTCACCCGAAGCGTCCGGCGACCCCCTGGTCCGGGCCGCCGACCTGCTCGGACCCCTGGCCTTCGGCCAGCGGGTGCTGGTGCTGGCCCAGCCGCGCTCGGGCCGGACGAGCCTGCTCAGGGCCATCGGCGCCGCGGTGGCCGACTCGGCCCACCTCTGCGTGTTGCTCGCCGACGAGCGACCCGAGGAGGTGCCGCAGTGGGAGAGCGCCCTGCCCAATGCGGAGCTGTTCGCCGCGACGGCGGACCAGGAGCCCCGCGACCAGGTGAGGGAGGCGGAGCTCGCGATGGGCCACGCGAAGCGGCTCGCCGAGGGGGGCGAGGACGTGGTGGTGCTGATCGACTCGCTCTCCCGCCTGGCGCTCGGCTACCGCGACGCGGCGCGAGTCAAGCGGATTTTCGGGGCGGGGCGCGAGCTCGGTGATGATCGAAGCGGCTCGCTGACTGTGATCGCGACCGTGCTCGAGTCCGACGACCGCGGGGCCGAGGTCCGCGAGGCCCTGGAGACGACGGAGAACCTGCTCCTCCGGCTCGATGCCGGGCTCGCCGCCAAGGGGATCGTCCCGGCTCTGGTCCCAGGCGACTCACGGGTCTCGGGGGAGGATCAGCTGCGCGACCCCGAGGAGCTCGAGAGGGTGCGGCGCCTGCGCGATGAGCTCAGCGGGCTCGACGCCGAGCAGGCGGCGCGGGCGCTCGGCGAGCAGATCGCCGCCACCGCCAGCAACGCCGAGCTGCTGGCGCGGCTCTAG
PROTEIN sequence
Length: 431
MALKDEHLADLHRRARDQRVSGYRMMTRDELIAVLEEGVGAEEIAEGEPSAEEAEERIREPESGGREPKPERREPKPERREPEPEPDAEPVTGVLDRMPAGYGFLRLSGLRESEGDVYVSASQIRRCELRPGDEVSGPARPPRRGERHRALVRVESVNGQSPEGERTTFEDITPAPPHRRLLSPEASGDPLVRAADLLGPLAFGQRVLVLAQPRSGRTSLLRAIGAAVADSAHLCVLLADERPEEVPQWESALPNAELFAATADQEPRDQVREAELAMGHAKRLAEGGEDVVVLIDSLSRLALGYRDAARVKRIFGAGRELGDDRSGSLTVIATVLESDDRGAEVREALETTENLLLRLDAGLAAKGIVPALVPGDSRVSGEDQLRDPEELERVRRLRDELSGLDAEQAARALGEQIAATASNAELLARL*