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H1-18-all-fractions_k255_942020_7

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(5229..5897)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00037F8E62 similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 222.0
  • Bit_score: 328
  • Evalue 2.60e-87
LuxR family transcriptional regulator {ECO:0000313|EMBL:KDN18125.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 218.0
  • Bit_score: 324
  • Evalue 9.10e-86
two component transcriptional regulator, LuxR family similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 215.0
  • Bit_score: 317
  • Evalue 1.70e-84

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Taxonomy

Amycolatopsis rifamycinica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 669
GTGGCGGTGACTTCGCTGCGGGTGCTGCTCGTCGACGACGACCCGCTCGTGCGGACCGGGCTGGCGATGATCCTCGGGAGTGCCCCGGACATCGTCGTCGTCGGGGAGGCCGGGGACGGGGACGAGGCGGTCGGGCAGGTGCGCGCGCTCGCGCCCGACATCGTGCTCATGGACATCCGCATGCGGCGGATGGACGGGATCGCCGCCACCGCCGCCGTGACCGCGCTGCCCGACGCGCCGCAGGTGCTCGTGCTGACCACCTACGACCTCGACGAGTACGTGTTCGACGCGCTCGCCGCCGGGGCCGGCGGGTTCCTGCTCAAGGAGGGCTCGCCGCGGGAGATCGTCGAGGCGGTCCGGGTCGTCGCGAAGGGCGAGATGATGCTGTCGCCCGGCACCACCCGCAAGCTCGTCGGTCACTTCGTCGCCGCGCGGGCCAACCCGCGGCGGGTGCGGGCGCGGGCCAAGCTCGCCGAGCTGTCCGGACGGGAGCGGGAGGTGGTCGCGGCCGTCGCGCAGGGCAAGTCCAACGCGGACATCGCCGGTGAGCTGTTCCTGAGCGAGGCGACCGTGAAGACCCACATCACCAGGACCTTCGCCAAGCTGGACGTCACCAACCGCGTCCAGCTGACGATCTTCGCCTACGAGGCGGGGATCGTCAGCCCGTAG
PROTEIN sequence
Length: 223
VAVTSLRVLLVDDDPLVRTGLAMILGSAPDIVVVGEAGDGDEAVGQVRALAPDIVLMDIRMRRMDGIAATAAVTALPDAPQVLVLTTYDLDEYVFDALAAGAGGFLLKEGSPREIVEAVRVVAKGEMMLSPGTTRKLVGHFVAARANPRRVRARAKLAELSGREREVVAAVAQGKSNADIAGELFLSEATVKTHITRTFAKLDVTNRVQLTIFAYEAGIVSP*