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H1-18-all-fractions_k255_6085441_5

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(2246..2716)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037BD2F1 similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 156.0
  • Bit_score: 245
  • Evalue 2.10e-62
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:EOD64708.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 156.0
  • Bit_score: 243
  • Evalue 1.40e-61
rpoE; ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 156.0
  • Bit_score: 236
  • Evalue 3.60e-60

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Taxonomy

Amycolatopsis vancoresmycina → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 471
GTGATCGTGAAACCGTTCGAACAGGTCGTGGCCGAGTACGGGTCGATGGTGCTGCGGGTCTGCCGCGCCGTCGTCGGCCCGGTCGACGCCGAGGACGCCTGGTCAGAGACGTTCCTGGCGGCGCTCAAGGCGTATCCGGAGCTGCCCGCCGGCGCCAACGTCGAGGCGTGGCTGGTCACGATCGCGCACCGCAAGGCCATCGACGTCACCCGTGCCCGCGCGCGCCGACCGATCCCCGTCCACACCGTCCCCGAACAGGCGAGCACGGCGGCGACGGTGGACGGCGACCTGTGGGACGCGGTGGCGAAGCTGCCGGACAGGCAGCGCACCGCCGTCGCCTACCACTACCTCGGCGGGCTGCCGTACAGCGAGGTCGCACGCATCACCGGGGGCAGCACCGACGCCGCCCGGCGCGCGGCGGCCGACGGCGTCAAGGCCCTGCGGACCGCTACTGAGAGGGAGGAAGCATGA
PROTEIN sequence
Length: 157
VIVKPFEQVVAEYGSMVLRVCRAVVGPVDAEDAWSETFLAALKAYPELPAGANVEAWLVTIAHRKAIDVTRARARRPIPVHTVPEQASTAATVDGDLWDAVAKLPDRQRTAVAYHYLGGLPYSEVARITGGSTDAARRAAADGVKALRTATEREEA*