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H1-18-all-fractions_k255_4328674_5

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(3517..4065)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor n=1 Tax=Amycolatopsis alba RepID=UPI00037D4D46 similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 180.0
  • Bit_score: 282
  • Evalue 2.30e-73
RNA polymerase sigma24 factor {ECO:0000313|EMBL:KFZ79631.1}; TaxID=1427749 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 180.0
  • Bit_score: 283
  • Evalue 1.50e-73
Conserved putative membrane protein similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 180.0
  • Bit_score: 282
  • Evalue 6.60e-74

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Taxonomy

Amycolatopsis sp. MJM2582 → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 549
GTGTCTGATGAGGAGGAGCTCGTTCGGCGGGTCGCGCGGGGAGACCGTGCGGCGTTCGAGCGGCTGTACCGGCGCACGGCGCCGTGGCTGGCGGTTCGGCTGCGGCGGCGGTGTGCGGACGAGCAGCTCGTCGCCGAGGTGATGCAGGAGACCTACCTCGCGGTGTGGCGTGCGGCGGGCAGCTTCGCGGGGGCCGCGGTGGACGGGTCCGCGGTCGGCTGGCTGTGGACGATCGCGGCGCGGCGGCTGGTGGACGCGTTCCGCCGGCGTGCCAGGGAAGCCGCGCCGGGCCTCGGGGTGGGGGCACCTGGCCTGGCCGCCGAACCCGTGGCCCCCGCCGCGGAGGACGAGGCACTGTCCGGTGTGGTCGGTGACGAGGTCGGCGTGGCACTGGCCCGGCTGGCACCGGAACTGCGGCAGGTGTTGCAGGCCATGGTGGTCGACGGCCTCACGGTCCGGGAAACCGCGACGCTGCTGGGAGTTCCGGAAGGCACGGTGAAGACGAGGGCCCGTCGCGCCCGCCTGGCGATGAGAGAGGCACTGGCATGA
PROTEIN sequence
Length: 183
VSDEEELVRRVARGDRAAFERLYRRTAPWLAVRLRRRCADEQLVAEVMQETYLAVWRAAGSFAGAAVDGSAVGWLWTIAARRLVDAFRRRAREAAPGLGVGAPGLAAEPVAPAAEDEALSGVVGDEVGVALARLAPELRQVLQAMVVDGLTVRETATLLGVPEGTVKTRARRARLAMREALA*