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H1-18-all-fractions_k255_3854612_16

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(16473..16997)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0KG38_SACES similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 168.0
  • Bit_score: 228
  • Evalue 3.80e-57
RNA polymerase ECF sigma factor {ECO:0000313|EMBL:CEL15753.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 174.0
  • Bit_score: 239
  • Evalue 3.00e-60
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 168.0
  • Bit_score: 228
  • Evalue 1.10e-57

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Taxonomy

Kibdelosporangium sp. MJ126-NF4 → Kibdelosporangium → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGCGACAGCCGGACGAGGAAAGCTTCCGCGCCTTCGCGGTCGAGCACGCCGCACGACTGCGCAGGTCGGCGTACCTGTTCTGCGGTGACTGGCATCTCGCGGAGGACCTGATGCAGAGCGCCCTGATCAAGATCTACCGCTCGTGGACGAGGGTGGAGAAGGACGAGAGCCTGGGGAACTACAGCCGGACGGTCCTGCTGCGCACGTGGCTGGACGAGAAGCGCCGGCCGTGGCGGCGGTCCGAGCAGTCCGAGGCCATGGTCCCGGAACGGCACGACGACGCACGCGGCCCGGCGGACAGCCCGGAGCGGCTGTGGGCACGCGACCTGGTGCACAGGGGCCTGTTGCGGTTGCCGCCCCGGCAACGCGCGGTGCTGGTCCTGCGGTACTTCGACGACCTGTCCGTCGCCGAGACCGCGGAGGTCATGGGGTGCTCGGAGGGAACGGTCAAGAGCCAGACCGCCCGCGGACTCAACGCGCTGCGGAGCTCGGTCTCGGATTTGGTGGGGAGGGTCGCGTCATGA
PROTEIN sequence
Length: 175
MRQPDEESFRAFAVEHAARLRRSAYLFCGDWHLAEDLMQSALIKIYRSWTRVEKDESLGNYSRTVLLRTWLDEKRRPWRRSEQSEAMVPERHDDARGPADSPERLWARDLVHRGLLRLPPRQRAVLVLRYFDDLSVAETAEVMGCSEGTVKSQTARGLNALRSSVSDLVGRVAS*