ggKbase home page

H1-18-all-fractions_k255_3854612_19

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(18409..18927)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0KD39_SACES similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 172.0
  • Bit_score: 287
  • Evalue 5.20e-75
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CEL15756.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 172.0
  • Bit_score: 295
  • Evalue 3.50e-77
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 172.0
  • Bit_score: 287
  • Evalue 1.50e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Kibdelosporangium sp. MJ126-NF4 → Kibdelosporangium → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 519
GTGGAGCAGCGCGATGAGCAGGACTTCGCGGAGTACTTCGCGGCTCGGCGAGACGCCGTGCGGAGGTCCGCGTACCTGTTGTGCGGTGACTGGCACCGTGCGGACGATTTCGCGCAGACCGCGTTCGTCGCGTTGCACCGGCGATGGCGCAAGATCCGGGACCGCGGGGCCCTGGACGCCTATGTCCGCAGGACGCTGGTGCGCGCGGTGATCGACGAGTCTCGGCGCCCCTGGCGGCGGGAGCGGTTCGTCGAGGAGCTGCCGGAGACGCCGTCGTCGGACGGTGAGGTCGGCGACTCCGTGGCGACCAGGTCCGCGCTGCTCGACGGCCTGCGGGCGGTACCGCCGCGCCAGCGCGCGGTGCTCGTCCTGCGGTACCTCGAGGGACTGGACGTCGCGGCCACGGCCAAGGCGCTCAAGTGCTCCGAGGGCACCGTGAAGAGCCAGACGGCCAGAGGGCTGACGGCGCTGCGCCAGGCGCTCGGCGGCACCCTGGACGACCTGAGGTCCGCCTCATGA
PROTEIN sequence
Length: 173
VEQRDEQDFAEYFAARRDAVRRSAYLLCGDWHRADDFAQTAFVALHRRWRKIRDRGALDAYVRRTLVRAVIDESRRPWRRERFVEELPETPSSDGEVGDSVATRSALLDGLRAVPPRQRAVLVLRYLEGLDVAATAKALKCSEGTVKSQTARGLTALRQALGGTLDDLRSAS*