ggKbase home page

H1-18-all-fractions_k255_2814015_3

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(1464..4169)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00035EA39F similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 881.0
  • Bit_score: 886
  • Evalue 1.70e-254
Tetratricopeptide TPR_1 repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 862.0
  • Bit_score: 863
  • Evalue 4.50e-248
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:AIJ20434.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 862.0
  • Bit_score: 863
  • Evalue 2.20e-247

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2706
GTGACCGTGGGGGGCCAACAGGCGCCGGGACACGATCGCGCGCTCGGGACCGACGCGCTCCGGGCGACGGTCGCAGCGGCCGCCGAACAACGGCGACGGGCGGTGGCGGCGGCGTCGGCCGGCCGCCCCGCCGAGGCGATCAAGATCCTCACCCGGACGCTTCGCACACTTCCCGTCGGCGCCGGTTCGGCCGACGTCGTCGCGATACGCGCGCGAGTTCTCCTCTCACTCGGGTGGGTGCAGGCGGACACGGCCTCACTGGCCGACGGACTCGTGCACCTCGGAACGGCTCGCGACCTGGTCAGCGGCCTGCACGACGGCCCGGAACGGTTGGCCCTGCTGGGGTTCGCCGACCAGCAGCACGCGCTGGTGTTGTTCCGCGCGGGCCGGACGCCGGAGGCCATAGAGCTGTTCGACCGCGCCATCCCCTTGCTGGAGAAGGCGATCGACAGCCCCACCGGCGATCCCGAGATGCTCGCCAGGGCGTTCCTGAACCGGGGCTACGCGCACACCACCCTGGGGCGGCCCGGTCCGGCCGAGGCGGACCTGCGCCGCTGCATCGACCTCTCCATCGAACATGACCTGCCGGTCATGAAGGCCAAGGCCATCAGCAACCTCGGTGACATCGCCCTGCTGGTCGGCGACATCCCCGGTGCGCTCGGGCATTTCGCGGAGGCCGTGCGCCTCTTCCGGGCCCTGGCGCCGAGCCTGGTCGCCCGCACCCAGCTCGACCAGGCGCGTGCGTTGCTCACCGCCGGCCTCGCTGAGGAAGCCGCCCGTCTGCTCGACGAGGCGTTGCCCGTGCTGCGCGAACAGCGGCTCAGCCAGGACCTCGCGGAGGCCGAGATCGTCCGGGCCGCCGCCGCGTTGCTGCAGGGTGACCGGGAGCTGGCCAAGCAGGTCGCCGGGTCGGCGCACCGCCGGTTCGTCCGGCGCGGCAACATGTCGTGGGCCGAGGTGGCCGCGTTGACCAAGATGCGGACCGAGGCCGACGCGGCCCTGGCCGGGCTGTCGACGACGGCCACCGCGAAGAAGGCCGCCGCGCTCGCGCAGCGGCTGTCGAGTTCGGGGCTCACCGACGAGGCGGCCATGGCGCGGATGCTCGGCGTGCGGCTCGCGCTGCGGCGCGGGGCGGTCGACGTCGCGGAGACGTTGCTCGGGCAGGTGCCCGCGCCGGGCAAGATCGCGCCGATCGACCACAAGATGATGCTGCGGCTGTGCCGGGCGGAGCTGGCGGTCGCCCGTGGGCAGACCCGAATCGCGCTCGCGCAGGCCAAGGCCGGGTTCGACGAGCTGGGCGCGGCCCGCGACCGGATGGGCGGCCTGGACCTCGTCTGCGGCACGGCCGTGCACGGCCTGGAGCTGGCCAGGCTCGCGGTCGGCATCGTGCTGGGTGACGCGCGGACCGACGCCGACGCGCGGCGGCTGCTCGCCTGGCAGGAACGCACGCGCGCGCAGGTCTACCGCTACGAGCCGATGCCCGCGATCGACGACCCGGAGCTGGCCAGCAAGGTCGCGGAGCTGCGGACCGTGCTGCGCACCCTGCAGCAGGCCCGGCTGGAGCGGCGGCCCGTCGCACACCTCGAGCAGCGGTCGGTCGCGTTGCAGCGGGAGGTCAACCGGCTCGGCTGGCACACCTCGCAGTGGGGCAGGCCGCGGCCGGTCTCGTCACCCGACGAGGTGATCGAGCACCTCGGCGACCGAGCGCTGATCAGCTTCGCCGGACCGTCGAGCGACCTGGCCGCCGTGGTCGTCGCCGGCGGGCGGACCAGGCTCGTGCGGCTAGGCGCGAAGCAGGACGTGCTGGAGACGGCGCGCCAGCTGCACGCCGACCTGGACGCGCTCGCGCCGGACGAGCTGATCCCGCCGCTGGTGACCGCGGTGTCGCAGTCCGCGCGACGGCGGATCCAGGCGCTCGACGGCATGCTGTTCGGTCCGGACGGGATCTCGGCGTCCCTGATCGGCGACCGGGAGCTGGTCGTGGTGCCGTTCGGTGAGCTGTACTCCGTGCCGTGGGAGACGCTGCCGTCGCTGCGCGGACGCGCGGTGTCGGTGGCGCCGTCGGCGACCGCGTGGGTGAGCGCCGGCGAGGTCGTCTACAACGGCGGGCCGGTCGTGCTGGTGCGCGGCCCGAACCTGCCGTCCTCGGCGACCGAGCTGGACCAGCTGCGGGAGGTGTACCCGGGCGCGATCGTGCTGGACGGCGAGGAGGCCACCACCGGCGCGGTCCTCAAGGCGATGGACGGCGCGAAGCTCGTGCACATCGCCGCGCACGGCACCCACGAGTCGGCGAACGCGATGTTCTCGCGGCTCGAGCTGTACGACGGCGGGCTGCTCGCGCACGAGGTCGCGCGGCTGCCGAACCCGCCGGCACACATCGTGCTCGCGGCGTGCGAGCTGGCGCTGTCGCACATCCGGCCCGGTGACGAGCCGCTCGGGTTCGCCGGCGCGATGCTCGCGAGCGGGTCGCGGACCGTGGTCGCGGCGGTCAACCGGGTGGGGCACCGGTCGGCGGCGGTGGCCATGACGGACTACCACCGGCGCCTGGCGAACAGGCCGGTCGCCGACCTCGCGGCGGACCTCGCCGTGGCGATGACCGACTACCACCGCCGGGTCGCCTCCGGCGTCAGCCCGGCCCGCGCACTGGCCGAGGCGACGGCCGAGGACCCGCTTCGTCGACCGTTCATCCTGCTCGGAGCGGGTTAG
PROTEIN sequence
Length: 902
VTVGGQQAPGHDRALGTDALRATVAAAAEQRRRAVAAASAGRPAEAIKILTRTLRTLPVGAGSADVVAIRARVLLSLGWVQADTASLADGLVHLGTARDLVSGLHDGPERLALLGFADQQHALVLFRAGRTPEAIELFDRAIPLLEKAIDSPTGDPEMLARAFLNRGYAHTTLGRPGPAEADLRRCIDLSIEHDLPVMKAKAISNLGDIALLVGDIPGALGHFAEAVRLFRALAPSLVARTQLDQARALLTAGLAEEAARLLDEALPVLREQRLSQDLAEAEIVRAAAALLQGDRELAKQVAGSAHRRFVRRGNMSWAEVAALTKMRTEADAALAGLSTTATAKKAAALAQRLSSSGLTDEAAMARMLGVRLALRRGAVDVAETLLGQVPAPGKIAPIDHKMMLRLCRAELAVARGQTRIALAQAKAGFDELGAARDRMGGLDLVCGTAVHGLELARLAVGIVLGDARTDADARRLLAWQERTRAQVYRYEPMPAIDDPELASKVAELRTVLRTLQQARLERRPVAHLEQRSVALQREVNRLGWHTSQWGRPRPVSSPDEVIEHLGDRALISFAGPSSDLAAVVVAGGRTRLVRLGAKQDVLETARQLHADLDALAPDELIPPLVTAVSQSARRRIQALDGMLFGPDGISASLIGDRELVVVPFGELYSVPWETLPSLRGRAVSVAPSATAWVSAGEVVYNGGPVVLVRGPNLPSSATELDQLREVYPGAIVLDGEEATTGAVLKAMDGAKLVHIAAHGTHESANAMFSRLELYDGGLLAHEVARLPNPPAHIVLAACELALSHIRPGDEPLGFAGAMLASGSRTVVAAVNRVGHRSAAVAMTDYHRRLANRPVADLAADLAVAMTDYHRRVASGVSPARALAEATAEDPLRRPFILLGAG*