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H1-18-all-fractions_k255_2846372_19

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 13852..15297

Top 3 Functional Annotations

Value Algorithm Source
Arabinose efflux permease-like protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B915_STRRD similarity UNIREF
DB: UNIREF100
  • Identity: 75.1
  • Coverage: 474.0
  • Bit_score: 694
  • Evalue 4.00e-197
Conserved putative membrane protein similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 454.0
  • Bit_score: 702
  • Evalue 7.10e-200
Conserved putative membrane protein {ECO:0000313|EMBL:AIG76383.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 454.0
  • Bit_score: 702
  • Evalue 3.50e-199

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Taxonomy

Amycolatopsis japonica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1446
ATGTCCCCAACCAACGCCGCGCCGCCGCGGCCCAACGTCGTCGTGGTGGTGCTGGCTTTCGGCGGCATCGTGGTCTCGCTGATGCAGACGCTGGTGATCCCGCTGGTCCCGCGGTTCCCCGAGCTGCTCGGCGCGTCACCGGCCGACGCCACCTGGGTGATCACCTCGACGCTGCTCGCCGGCGCCGTCGCCACGCCGGTCGTCGGCCGGCTCGGCGACATGTACGGCAAGCGGCGGATGCTGCTGATCAGCCTCGTGCTGCTGGTCGTCGGCTCGGTCATCTGCGCGCTGTCCGGCACCCTGTTGCCGATGATCGTCGGCCGGGCGCTGCAGGGCGCCGCGTCCGGTGTCATCCCGCTGGGCATCAGCATCATGCGCGACGAGCTGCCGGCCGAACGCCTGGGCGCGGCGACCGCCGTGATGAGCGCGTCGCTGGGCGTCGGCGGGTCGCTCGGGCTGCCGGCCTCGGCGGTGCTCGTGGAGAAGACGGACTGGCACGTGCTGTTCTGGACCGCCGCCGGGCTCGGCGTCGTGGTCACCGCGCTCGTCGTGGCGCTGGTGCCGGAGTCGAGCGTGCGGACGGGTGGCCGGTTCGACTTCGTCGGCGCGGCCGGGTTGTCGACGGTGCTGGTGTGCCTGCTGCTGGCGATCTCCAAGGGCGCCGACTGGGGCTGGACGAACGGGCTGACGCTCGGGCTGTTCGCCGCGGCGGTGGTCGTGCTGCTGCTGTGGGGGTGGTTCGAGCTGCGGACGCGCCAGGCGCTGGTGGACCTGCGGACGACCGCGCGTCGGCAGGTGCTGCTGACGAACCTCGCGTCGGTGGTGTTCGCGTTCGCCATGTTCGCGATGTCCCTGGTGCTGCCGCAGATCCTGCAGCTGCCCACCGCCACGGGCTACGGGCTGGGCCGGTCGCTGCTGGTGACCGGTCTGGTGCTGGTGCCGGCCGGCCTGGTGATGATGGCGACGGCGCCGCTGTCCGCGCGGCTGTCCCGGGCCCGCGGGCCGAAGGTGACGCTGATGGTCGGCGCGGTGGTGGTCGCCGCCGGGTACGGGCTCGGCGTCGTGCTGATGTCCGCGATCTGGCAGCTGGTGCTCGTGTCCGGCCTGATCGGCGCCGGCATCGGCTTCGCCTACGGCTCGATGCCGGCCCTGATCATGGGTGCGGTGCCGGTGTCGGAGACCGCGGCGGCGAACAGCCTGAACACGCTGATGCGCGCCATCGGCACGTCGGTGTCCAGCGCGGTGGCGGGCATGATCCTGTCGCACCTGACCGTCTCGCTCGGCCCGGCGGTGGTGCCGTCGCAGGACGGGTTCCGGCTGATCATGGCGCTGGGCAGCGGGATGGCACTCGTGGCGCTGGTGATCGCGGCGTTCCTCCCCGGGCAGCGCCGGCACCAGGAGTTCCCGCTGGGCCCGCGCGAGGAGGCCGTTCCCGCGGCGCGCTGA
PROTEIN sequence
Length: 482
MSPTNAAPPRPNVVVVVLAFGGIVVSLMQTLVIPLVPRFPELLGASPADATWVITSTLLAGAVATPVVGRLGDMYGKRRMLLISLVLLVVGSVICALSGTLLPMIVGRALQGAASGVIPLGISIMRDELPAERLGAATAVMSASLGVGGSLGLPASAVLVEKTDWHVLFWTAAGLGVVVTALVVALVPESSVRTGGRFDFVGAAGLSTVLVCLLLAISKGADWGWTNGLTLGLFAAAVVVLLLWGWFELRTRQALVDLRTTARRQVLLTNLASVVFAFAMFAMSLVLPQILQLPTATGYGLGRSLLVTGLVLVPAGLVMMATAPLSARLSRARGPKVTLMVGAVVVAAGYGLGVVLMSAIWQLVLVSGLIGAGIGFAYGSMPALIMGAVPVSETAAANSLNTLMRAIGTSVSSAVAGMILSHLTVSLGPAVVPSQDGFRLIMALGSGMALVALVIAAFLPGQRRHQEFPLGPREEAVPAAR*