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H1-18-all-fractions_k255_4973116_1

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(3..1901)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 678.0
  • Bit_score: 844
  • Evalue 9.80e-242
Transcription termination factor Rho n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WHL1_ACTMD similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 683.0
  • Bit_score: 817
  • Evalue 9.10e-234
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 683.0
  • Bit_score: 817
  • Evalue 2.60e-234

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Taxonomy

Actinokineospora spheciospongiae → Actinokineospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1899
GTGAGCAACACTGATCTGCTGGGCAGTGACACTGCCAATGGCACGGTCGCCGACGCCAATGCGGCCGACAACACCACGCGCACCAGCGCAAACGGGGGTACGAAGCGTCGCGCCGGCTTGACCGGAATGGTGCTGGCCGAGCTTCGGGAGCTCGCCGGCCAGCTCGGCATCACCGGTACGGCCGGGATGCGCAAGGGCGACCTCATCGCCGCTATCAAGGAGCGGCAGAACGGGAGCTCCGCCAAGACCGCGAACACGTCCGACACGTTGCCGCTTGGCATCGACGACGCGCCGGCGAAGAAGAAGGCCGCACCGAAGGCTGCGTCCGACGTGGTGGCCACACCCGCCGCGGAGCCCAAGGCCGAGCAGCCGGAGCAGTCCGACGCGGCCGGTTCGGCCGACGAGGGCGGTGCTCGCCGGGACGGCAACCGTCGCCGGCGCAGCGCGAACCGCGCGGTCGGGGCCCCCGAGCAGGAGGCGAAGCGTCCGGAGGAGCGTCCGGTCGCCGCGGCTGTGGCCGTCGAGGACAAGCCGCAGGCCGAGAAGCGCGAGGAGCGTGGCGGCCGGGAGCGGAACAACGACCGCAATGACCGCAACGACCGCAACGAGCGCCGCAACGGTCGCAACCAGGACCGGAATTCCGATCGCAATTCCGACCGGAACTCCGATCGCAACCAGGACCGGAACTCCGACGGCCGGGGCGACCAGCGCAACACGGGTCGCGACAACATGGCCGTCTCCGACGAGGACGACGACGACGGCGACGGTCGCCGCCGCGGTCGCCGGTTCCGCGACCGTCGCCGCCGCGGCAGCCCTAGCAGCAGCAGCGGTGGCCGCGGGGACAGCCCGGACACCGAGGTGCGCGAGGACGACGTCCTGCTGCCGGTCGCCGGCGTGCTCGACGTGCTGGAGAACTACGCGTTCGTGCGTACCTCCGGTTACCTCGCCGGGCCGAACGACGTGTACGTGTCGCTGTCGCTGGTCCGCAAGTACGGCCTGCGCCGCGGTGACGCGATCACCGGCATGGTGCGCCAGCCCCGGGAGGGCGAGCAGCAGCGGCAGAAGTTCAACCCGCTGGTGCGCGTCGAGACCATCAACGGGCTGGACCCGGACCAGGCCAAGAACCGGCCGGAGTTCACCAAGCTGACGCCGCTGTACCCGAACGAGCGGCTGCGCCTGGAGACCGAGTCGCACATCCTCACGACCCGCGTCATCGACCTGGTGATGCCGGTCGGCAAGGGGCAGCGCGCGCTGATCGTGTCGCCGCCGAAGGCCGGCAAGACGTCGGTCCTGCAGGCCATCGCGAACGCGATCACGACCAACAACCCCGAGTGCTACCTGATGGTCGTGCTCGTGGACGAGCGGCCTGAAGAGGTCACCGACATGCAGCGGTCGGTGAAGGGCGAGGTCATCGCCTCGACCTTCGACCGTCCGCCGGGTGACCACACCACGGTCGCGGAGCTGTCGATCGAGCGGGCCAAGCGCCTGGTCGAGATGGGCCACGACGTGGTCGTGCTGCTCGACTCGATCACCCGTCTGGGCCGCGCGTACAACCTGGCGGCCCCGGCGTCCGGCCGGATCCTGTCCGGTGGTGTCGACTCGACGGCCCTGTACCCGCCGAAGCGCTTCCTCGGCGCCGCGCGGAACATCGAGGACGGCGGCTCGCTGACCATCTTCGCGACCGCGCTGGTCGAGACGGGGTCCGCGGGTGACACGGTGATCTTCGAGGAGTTCAAGGGCACGGGTAACGCCGAGCTCGTCCTCGACCGCAAGATCGCCGACAAGCGCACGTTCCCGGCGGTCAACGTCGACGCGTCCAGCACCCGTAAGGAAGAGATCCTGATGGCTCCGGAGGAGCTGCGGGTCGTCTGGCAGCTGCGCCGGGTGCTGCACGCGCTC
PROTEIN sequence
Length: 633
VSNTDLLGSDTANGTVADANAADNTTRTSANGGTKRRAGLTGMVLAELRELAGQLGITGTAGMRKGDLIAAIKERQNGSSAKTANTSDTLPLGIDDAPAKKKAAPKAASDVVATPAAEPKAEQPEQSDAAGSADEGGARRDGNRRRRSANRAVGAPEQEAKRPEERPVAAAVAVEDKPQAEKREERGGRERNNDRNDRNDRNERRNGRNQDRNSDRNSDRNSDRNQDRNSDGRGDQRNTGRDNMAVSDEDDDDGDGRRRGRRFRDRRRRGSPSSSSGGRGDSPDTEVREDDVLLPVAGVLDVLENYAFVRTSGYLAGPNDVYVSLSLVRKYGLRRGDAITGMVRQPREGEQQRQKFNPLVRVETINGLDPDQAKNRPEFTKLTPLYPNERLRLETESHILTTRVIDLVMPVGKGQRALIVSPPKAGKTSVLQAIANAITTNNPECYLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPGDHTTVAELSIERAKRLVEMGHDVVVLLDSITRLGRAYNLAAPASGRILSGGVDSTALYPPKRFLGAARNIEDGGSLTIFATALVETGSAGDTVIFEEFKGTGNAELVLDRKIADKRTFPAVNVDASSTRKEEILMAPEELRVVWQLRRVLHAL