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H1-18-all-fractions_k255_4998200_14

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(12048..13253)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor n=1 Tax=Kribbella catacumbae RepID=UPI00036BAE04 similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 406.0
  • Bit_score: 533
  • Evalue 1.30e-148
putative ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 396.0
  • Bit_score: 525
  • Evalue 7.50e-147
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB33851.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 396.0
  • Bit_score: 525
  • Evalue 3.70e-146

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Taxonomy

Kribbella flavida → Kribbella → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGACCGTCCCGTTGGAGGGCCTGCTGCGCGACCTGGCGCCGCGGGCCCTCGGCGCGGTCGTCCGCCGGTACGGGCACTTCGACACCGCCGAGGACGCGGTGCAGGAGGCCATGATCGCCGCGGCCGAGCAGTGGCCGCGCGACGGCCTGCCGGACGACCCGAAGGCGTGGCTCATCGCGGTCTCGGCCCGCCGGCTCACCGACCTGTTGCGTGCCGAGCAGGCGCGGCAGCGCCGGGAGAACACGTGGAGGCTGCCCGCGGTCGCGCCGACCGAGGACGGCGACGACACGCTGATCCTGCTGTTCATGTGCTGCCACCCCGCGTTGCCGCCCGAGCAGCAGATCGCGTTGACGTTGCGGTCGGTCGGCGGCCTGACGACGCAGGAGATCGCGCGGGCGTTCCTCGTGCCGGAGGCGACGATGGCGCAGCGGATCAGCCGTGCCAAGCAACGGGTCCGCGCCAGCGGGGTGCCGTTCCGGCTGCCGCCGGACCGGACGTCGCGACTGGCCGCGGTGCTGCACGTGCTGTACCTGATCTTCACGGAGGGGTACGCGAGCACGGCCGGACCGCACGCGTACCGGGCCGAACTGTCCACCGAGGCGATACGGCTGACCCGGATCGTCCACCGGCTCCTGCCGCGCGACGGGGACGTCGCCGGGCTGCTGGCGCTGATGCTGCTGACCGACGCCCGCCGGCCCGCCCGCGTCGGGCCGGACGGGGCGTTGGTCCCCCTGGAGTCCCAGGACCGGTCGCTGTGGCGTGCCGATCTCATCGCGGAGGGGACCGAGCTGGTGACCGCGGCCATGTCGTCCGGTCCGTCCGGGCCCTACCAGCTGCAGGCCGCGATCGCCGCACTGCACGACGAGGCCCGCACCGCCGCGGACACGGACTGGCCGCAGATCGAGGCCCTGTACGGGGTGCTGCTCGCGCAGCGGCCCAACCCGATGACGGCGCTCAACCACGCGGTGGCGGCGGCCATGGCGCGCGGGCCGGCGGCGGGGCTCGCGCTCCTGTCCACCGTGGCCTCGGACAAGCGGTTGGCGACGCACCACCGGCTGCACGCCGTTCGCGCTCATCTGCTGGAGCTGTCCGGGGACGTGCCGGGCGCGCTGGCCGCGTACCGGCAGGCCGCGCGGCTCACGCGGTCCCTGCCGGAGCAGCGTTACCTGAACATGAAGGCCGCCGCGCTCGCCCAGCGCCACTGA
PROTEIN sequence
Length: 402
MTVPLEGLLRDLAPRALGAVVRRYGHFDTAEDAVQEAMIAAAEQWPRDGLPDDPKAWLIAVSARRLTDLLRAEQARQRRENTWRLPAVAPTEDGDDTLILLFMCCHPALPPEQQIALTLRSVGGLTTQEIARAFLVPEATMAQRISRAKQRVRASGVPFRLPPDRTSRLAAVLHVLYLIFTEGYASTAGPHAYRAELSTEAIRLTRIVHRLLPRDGDVAGLLALMLLTDARRPARVGPDGALVPLESQDRSLWRADLIAEGTELVTAAMSSGPSGPYQLQAAIAALHDEARTAADTDWPQIEALYGVLLAQRPNPMTALNHAVAAAMARGPAAGLALLSTVASDKRLATHHRLHAVRAHLLELSGDVPGALAAYRQAARLTRSLPEQRYLNMKAAALAQRH*