ggKbase home page

H1-18-all-fractions_k255_5224024_19

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 21579..22235

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 158.0
  • Bit_score: 263
  • Evalue 1.90e-67
RNaseH ribonuclease n=1 Tax=Amycolatopsis nigrescens RepID=UPI000376100A similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 143.0
  • Bit_score: 261
  • Evalue 5.10e-67
rnhA; ribonuclease HI similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 158.0
  • Bit_score: 263
  • Evalue 3.80e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGACGACCTATGGTGACGGTCGCGAGTGGCTGGCGCAGCTGGTTTTCCCGGGGTTCAGCGCCAGATCGATGCTGATCGCATTCGCCCCGCGCGTGCCGCCGGACGCCGAGGGTGGCGCGGACCGGCTCGGGAAGACCGATGTGGGGATGAGGTCGCGGGCATGCCTGTCGGCCCGGCCCGCCCGCGTCGTCGCTACGCTCCCGGGCGTGTCCAACACCGTGGAGATCTACACCGACGGCGCGTGCAGTGGGAACCCCGGGCCCGGCGGATGGGGCGCCGTGCTCAAGTACGGGCAGCACGCCAAGGAGCTGTACGGGGCCGAGGCAGGCGTCACCACCAACAACCGCATGGAGTTGATGGCGCCCATTCGGGCTCTGGAGAGCCTGACCCGGCCGTCGGTCGTCGACATGTACACGGACTCCACGTACGTGCGGAACGGGATCATGCAGTGGCTGCCCAGGTGGAAGAGCAACGGGTGGCAGACCAGTGCCAAGCAGCCGGTGAAGAACGCGGACCTGTGGCGGCGGCTCGACGAGGCGGCCCGGTCGCACGAGGTGCGGTGGTACTGGGTCAAGGGGCACGCGGGGCACCCGGAGAACGAACGTGCCGACCAACTCGCCGTGCGGGGGGCGCAGGAGGCCGCCGCACACCGGTGA
PROTEIN sequence
Length: 219
MTTYGDGREWLAQLVFPGFSARSMLIAFAPRVPPDAEGGADRLGKTDVGMRSRACLSARPARVVATLPGVSNTVEIYTDGACSGNPGPGGWGAVLKYGQHAKELYGAEAGVTTNNRMELMAPIRALESLTRPSVVDMYTDSTYVRNGIMQWLPRWKSNGWQTSAKQPVKNADLWRRLDEAARSHEVRWYWVKGHAGHPENERADQLAVRGAQEAAAHR*