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H1-18-all-fractions_k255_5788384_9

Organism: H1-18-all-fractions_conc_125

near complete RP 31 / 55 MC: 3 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(10084..10869)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Frankia sp. BCU110501 RepID=UPI000366BB01 similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 169.0
  • Bit_score: 150
  • Evalue 1.50e-33
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 133.0
  • Bit_score: 148
  • Evalue 1.60e-33
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEH08451.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 133.0
  • Bit_score: 148
  • Evalue 8.10e-33

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Taxonomy

Frankia symbiont of Datisca glomerata → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 786
GTGACCAGCGACAACGGGGTCAACGAGACCGGGGCCGCACTTTTGTTGAAGGTGCTCCTCAAGCAGCGCCATCTCCAGGTCTACAGCGCGTTCGCGCGCGAGTACAACAAGGTCGCCGCGAAGATAGACCGCGAATTGACAAACACCAGCCCAAGCAAGGCCCAGTTCTACCGCTGGCTCTCCGGCGAACTAACCAAACTCCCGTACTCCCACCACTGCCGCGTACTGGAAGCCATGTTCCCCGACTGGGGCGTCGAACAACTCTTCCAGCCCTACCGCGGAAGCCTCAACGTCGTACCGAAACCCGGCACCACAGTCTCCACGCCAACACCGTCACCAGCCACCTCGACACCGGCCCGGCAAACCGGCACAAGTGACGTGGTCAACCACGAACTAGACCTGTCCGGTGACTGGTGGTGCGCCTGGCAGACGTCCAAGGACGACGTACCCCGCATCGACACCCACGCACTGAGAGTCGACCAACAAGGAGAGCGACTCCACCTCAGCGCCGACAGGGCACCGGCCGAAGGCAGCTACCGCTGGCACGGCGAACTACGCATCTGGGACAACGAGGCCCTACTGGGGTGGTACCGATCAACCGAGGGAGCCGTACGGTCCAAGGGCACCATGTACCTAGCCCTCCACCCCCACGGCGAACACGCCTGGGGCCGCTGGACCGGCATGAGCTACGACGGCCTCGTAGTCACCGGCTGGGGCGTCATCGCCCGCACCGAGGACCTAGCCCACAAGGTCGTTCAACACCTCGTAGACACTGGCAAGTCGTGA
PROTEIN sequence
Length: 262
VTSDNGVNETGAALLLKVLLKQRHLQVYSAFAREYNKVAAKIDRELTNTSPSKAQFYRWLSGELTKLPYSHHCRVLEAMFPDWGVEQLFQPYRGSLNVVPKPGTTVSTPTPSPATSTPARQTGTSDVVNHELDLSGDWWCAWQTSKDDVPRIDTHALRVDQQGERLHLSADRAPAEGSYRWHGELRIWDNEALLGWYRSTEGAVRSKGTMYLALHPHGEHAWGRWTGMSYDGLVVTGWGVIARTEDLAHKVVQHLVDTGKS*