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H1-18-all-fractions_k255_6250148_22

Organism: H1-18-all-fractions_conc_96

near complete RP 31 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 24795..25478

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal subunit interface protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X8Y2_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 237.0
  • Bit_score: 326
  • Evalue 1.30e-86
30S ribosomal protein S30 {ECO:0000313|EMBL:KJK34420.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 229.0
  • Bit_score: 333
  • Evalue 2.00e-88
sigma 54 modulation protein/ribosomal protein S30EA similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 231.0
  • Bit_score: 326
  • Evalue 3.80e-87

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Taxonomy

Lechevalieria aerocolonigenes → Lechevalieria → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGGACATCGTGGTAAAAGGCCGCAACGTCGAGATTCCCGATCATTACCGGGTACATGTCGAAGAGAAGATGTCGCGCCTGGAGCGGTACGACCGGAAGGTCATCCGCTTCGACGTTGAGTTGTTCCACGAACCCAACCGCAGGCAGTCCAAGAACTGCCAGCGGGTGGAGATCACCGGCAAGGGCAGAGGGCCCGCCGTTCGAGCCGAGGCATCCGCTGGCGACTTCTACGCCGCGCTTGACTTTGCCGTGTCGAAGCTCGAGAACCGTCTGCGTCGGCTGCATGACCGCAGGCGAGTGCACTACGGGCGTCGAAGTCCGGCCTCCGTCGCTGAGGCCACCTCCATCACCATCGGTGCGGTGCCGTTCGGCAACGACGCTCTCACGAAGAGCGAACCCGTCGGCCACGCCGCGACCCAGACCGCCTTACTGCCGACGAGAGAGTCGGCCTACGAGGGTATTCCGGAGCTTCCTGAGCAGCGTTGGGACATCGACGACCACCCGCCGGGAAGCATCGTGCGGGAGAAGTCGCACCCCTCCGAGCCGATGAGCGTTGACCAGGCTCTTTACCAGATGGAACTGGTCGGTCACGACTTCTACCTCTTCAACGACACCGAGTCGGGCAAGCCGAGTGTCGTCTACCGCCGTAAGGGATTCGACTACGGCGTCATCAGACTCGCCTGA
PROTEIN sequence
Length: 228
MDIVVKGRNVEIPDHYRVHVEEKMSRLERYDRKVIRFDVELFHEPNRRQSKNCQRVEITGKGRGPAVRAEASAGDFYAALDFAVSKLENRLRRLHDRRRVHYGRRSPASVAEATSITIGAVPFGNDALTKSEPVGHAATQTALLPTRESAYEGIPELPEQRWDIDDHPPGSIVREKSHPSEPMSVDQALYQMELVGHDFYLFNDTESGKPSVVYRRKGFDYGVIRLA*