ggKbase home page

H1-18-all-fractions_k255_7158938_31

Organism: H1-18-all-fractions_conc_96

near complete RP 31 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(31634..32092)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SYQ5_AMYOR similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 154.0
  • Bit_score: 234
  • Evalue 6.10e-59
rpoE; RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 154.0
  • Bit_score: 234
  • Evalue 1.70e-59
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:AGM07685.1}; TaxID=1156913 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 154.0
  • Bit_score: 234
  • Evalue 8.50e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Amycolatopsis orientalis → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 459
GTGCTGGCCTACGCCACCCGGTTGACCGGGGACCGGGCCGCCGCGGAGGACGTCGTACAGGAGACGCTGCTCCGCGCCTGGAAGCACGCCGATGATCTCGGCAACGACAGCAAGGGCTCGGTGCGTGGCTGGCTGCTCACCGTCGCCCGCAACATCGTCACCGACCGGGCAAGGGCCAGGGCGTCCCGACCGCAGGAGGTCGGGGAGCCGGTCGACGTGCCGGCCGTCGAGCGGGATCACGCCGAGCAGGTCGTCAACCAGATGGCCGTGCTCGGTGCCCTGGACAAGCTCACCGCCGAGCACCGGGAGGTGCTTGTCGAGATGTACTACCGCGGCCGCACGGTCACCGAGACCGCCAAGGTCCTTGGCATTCCTCCCGGTACCGTGAAATCACGGTCCTATCACGCCATGCGCACGCTGCGAGCGGTGCTCTCGGGAGCAAGGGAGGTGCCGGGATGA
PROTEIN sequence
Length: 153
VLAYATRLTGDRAAAEDVVQETLLRAWKHADDLGNDSKGSVRGWLLTVARNIVTDRARARASRPQEVGEPVDVPAVERDHAEQVVNQMAVLGALDKLTAEHREVLVEMYYRGRTVTETAKVLGIPPGTVKSRSYHAMRTLRAVLSGAREVPG*