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H2-16-all-fractions_k255_170410_1

Organism: H2-16-all-fractions_metab_114

partial RP 30 / 55 MC: 8 BSCG 32 / 51 MC: 10 ASCG 10 / 38 MC: 3
Location: 3..512

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 169.0
  • Bit_score: 259
  • Evalue 2.00e-66
RNA polymerase sigma-54 factor, RpoN similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 169.0
  • Bit_score: 276
  • Evalue 2.60e-72
RNA polymerase sigma-54 factor, RpoN {ECO:0000313|EMBL:AHG90787.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 169.0
  • Bit_score: 276
  • Evalue 1.30e-71

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 510
AAGAAGAAGTTCGAGGGCGAGAACAAGGAGTTCATCTCCAACAAGCTCAACTCCGCGAACTGGATGATTCAGGCCATCGAGCAGCGCCGGCAGACCATGCTCAAGGTGATGAACTTCATCGTGGACCGGCAGCGGGACTTCTTCGAGAAGGGGATCGAGTACCTCAAGCCGCTCACGCTGCGCGAAGTGGCCGAGGTAATCAACATGCACGAGTCCACGGTCAGCCGGGTGACCAACGAGAAGTACGTGCAGACGCCGCGCGGCGTCCTGCCGCTCAAATTCTTCTTCAGCAGCGCCCTCGCCACCGCCAGCGGGGAGGAGGCCAGCGCGCGCTCGATCCGGGCCAAGCTGCAGAAGATGGTGAGCGAGGAGGACAGCGCGAAGCCCCTCACCGACCAGCAGATCGTCCACCTGTTCCAGGAGCAGGGAATCCAGATCGCCCGCCGCACCGTCGCGAAGTACCGCGACCAGCTGGGCATCTTGCCGGCGCGGATGCGGAAGCGGGTATGA
PROTEIN sequence
Length: 170
KKKFEGENKEFISNKLNSANWMIQAIEQRRQTMLKVMNFIVDRQRDFFEKGIEYLKPLTLREVAEVINMHESTVSRVTNEKYVQTPRGVLPLKFFFSSALATASGEEASARSIRAKLQKMVSEEDSAKPLTDQQIVHLFQEQGIQIARRTVAKYRDQLGILPARMRKRV*