ggKbase home page

H2-16-all-fractions_k255_2655305_2

Organism: H2-16-all-fractions_metab_57

partial RP 27 / 55 MC: 3 BSCG 25 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(250..456)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GT29_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 68.0
  • Bit_score: 107
  • Evalue 3.80e-21
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 68.0
  • Bit_score: 107
  • Evalue 1.10e-21
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABF53193.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 68.0
  • Bit_score: 107
  • Evalue 5.40e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis alaskensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGCCAATCGGCACAGTGAAATTTTTCGACAACGCGAAGGGCTACGGCTTCATCACCAATGAGGCCGGCGGCAGCGATGCCTTCGTCCACATTTCCGCGGTCGAAGCGGCCGGGATGAGCACGCTCGAAAAGGAGCAGCGCCTGTCCTACGAGCTCGAGAACGGCAAGAACGGCAAGTCGAGCGCGGTGAACCTGCAGAGCGCGTAA
PROTEIN sequence
Length: 69
MPIGTVKFFDNAKGYGFITNEAGGSDAFVHISAVEAAGMSTLEKEQRLSYELENGKNGKSSAVNLQSA*