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H2-16-all-fractions_k255_3553201_14

Organism: H2-16-all-fractions_metab_conc_71

partial RP 23 / 55 MC: 1 BSCG 22 / 51 MC: 6 ASCG 10 / 38 MC: 1
Location: comp(16595..17278)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Polaromonas sp. CF318 RepID=J3CWP6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 201.0
  • Bit_score: 192
  • Evalue 3.00e-46
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 193.0
  • Bit_score: 183
  • Evalue 5.20e-44
Tax=GWA2_Burkholderiales_64_37_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 210.0
  • Bit_score: 192
  • Evalue 4.20e-46

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Taxonomy

GWA2_Burkholderiales_64_37_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
GTGCAGGCCCAACCTCATCCCGATCCGACGCTCGCCTTCGTGCGCGAGCCGGAGGACGACCGGGTGCCGGCCGACGTCACGCCGGCCGCCGACAGCGACGAGTTCCTGATGCATGCCTTCGCCGGCGGCGACGCCGCCGCCTTCACCCGCCTGTACGACCGCCACGAGCGGGCCACCTGGCGCTTCATCCGCCATCGCCTTGGTGCGCAGCACGAGGGCGCGGCCGACGACGTGCTGCAGGAGACCTGGATCAGCGTCGCACGCGCGGCGCCGCGCTATGTCGCGACGGCGCGCTTCACCACCTGGCTGTTCACCGTGGCCCGCAACCGCGTGATCGATCACCTGCGCGCCCAGTCCAATGCGATGCTGTCGATCGACGCGCCCCTGTCCGCGCCGGAGGACAGCGAGGGCGACGGGGAGCGCTGGGCCGACCGCGTCGCGGCCGAGGCGTCCGACGGCCCGCTGGCACGCATCGAATCGCGCCAGCAGGCCCAGGCCTTCCTCGAGGCGCTGGCGCAGTTGCCGGCGCCGCAACGCGAGGCCTTCGTGCTGCAGGCCGAGGGCGGACTCAGCATCGAGGAGGTCGCCAGCGCCACCGGCGTGGGCGCCGAGACGGCCAAGACGCGGCTGCGTTATGCGAAGTCCAGGCTGCGCACGCTGCTGGCCGGATGGAGGGTGGCATGA
PROTEIN sequence
Length: 228
VQAQPHPDPTLAFVREPEDDRVPADVTPAADSDEFLMHAFAGGDAAAFTRLYDRHERATWRFIRHRLGAQHEGAADDVLQETWISVARAAPRYVATARFTTWLFTVARNRVIDHLRAQSNAMLSIDAPLSAPEDSEGDGERWADRVAAEASDGPLARIESRQQAQAFLEALAQLPAPQREAFVLQAEGGLSIEEVASATGVGAETAKTRLRYAKSRLRTLLAGWRVA*