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H2-18-all-fractions_k255_75699_8

Organism: H2-18-all-fractions_metab_conc_34

near complete RP 43 / 55 MC: 7 BSCG 46 / 51 MC: 7 ASCG 11 / 38 MC: 1
Location: comp(7153..7488)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA01_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 111.0
  • Bit_score: 157
  • Evalue 5.30e-36
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 111.0
  • Bit_score: 157
  • Evalue 1.50e-36
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 111.0
  • Bit_score: 169
  • Evalue 1.40e-39

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 336
GCGCAGACGCCGGTCTCGCTCGAGAAGCCGGTCGGCGACGAGGACGAGTCGGAGTTCGGCCACTTCCTCACCGACGAGAATCTGCCGCTGCCCGACGAAGAGGCCGAGATCACGATGCGCAAGGAGACGCTCGGGAAGATCCTCGGGACGCTGTCCAGCCGCGAGCGACAGGTGCTCGAGCTGCGCTACGGCCTCGATGGCCAGCACCCGCGCACGCTCGACGAGGTCGGCCGGACGTTCAACGTCACGCGCGAGCGCATCCGCCAGATCGAGAACCAGAGCCTGAAGAAGCTCCGGGCGCTCGCCGAGGCGGTCAAGCTTCGCGACGTCGCGTAG
PROTEIN sequence
Length: 112
AQTPVSLEKPVGDEDESEFGHFLTDENLPLPDEEAEITMRKETLGKILGTLSSRERQVLELRYGLDGQHPRTLDEVGRTFNVTRERIRQIENQSLKKLRALAEAVKLRDVA*