ggKbase home page

H2-18-all-fractions_k255_4042125_6

Organism: H2-18-all-fractions_metab_conc_34

near complete RP 43 / 55 MC: 7 BSCG 46 / 51 MC: 7 ASCG 11 / 38 MC: 1
Location: comp(7667..8737)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NF35_DESAR similarity UNIREF
DB: UNIREF100
  • Identity: 37.4
  • Coverage: 174.0
  • Bit_score: 92
  • Evalue 8.70e-16
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 174.0
  • Bit_score: 92
  • Evalue 2.50e-16
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 38.0
  • Coverage: 158.0
  • Bit_score: 100
  • Evalue 3.40e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
GTGAGCGCGCTCGCTGCGGCACCTCCACGATCGGACGCGGCGTCGCACGAGGCGTACGCGGAGCGGCTCTACGAACGCCACCAACGTGCGATCTTCGGCTTCTGCCTGAAGCAACTGCGCCGCCGCGAAGACGCCGACGACGCCGTGCAGACGACGTTCATCTATGCATTGCTCAGTCTGCGGCGCGGGATCGTCCCGCAATTCGAGCTGCCCTGGCTGCTCACGATCGCGCGCAACGTCTGCTCGACGCGCAGGCGGTCGGGCATGCGGCGCGGTGCATACGAGACGCCGCAGGACCTCGATCTGCTGCAGGACACGCTCGCGTCGCCGGAACGCTCCGGCGAAGCGACGGCCGAGGAGTTGCGCATGGCCGTGTCCTCGCTTCCGGAAAGCCAGCGCAAGGCCCTCCTCCTGCGTGAATGGCGCGGGTTCTCGTACGACGAGATCGGATCGGAGCTCGGCCTGTCGCAGGCCGCGACCGAAGCGCTGCTCTTTCGCGCGCGCCAGAACGTCGCCCAGCGCCTCGGCGCCGGCCTCAAGACGCTGCAGGGAATCCCGCTCCTCACGTTCCTGCGCGGCTTGCTGCAGTCAGCGGCGGCGAAAACCGTCGCCGTAGGTGCCGCAACGGCGCTGACCGTCGTCACCGTCCCGGCCGCAGAGCGCGCGCTCTCCGCGTCGACGCCCACGCCTCGCCCAGCCGCGCACGTCGCCGGAACGACGACGGCGGTCGCCACGCCTGCCGTGCAGGTGCGACCGCAGGCACGACGCCGCGCACGGCCCACCCAGGCTCATCGCGTGGGTGCCACCGCGGCGCGGCCGCGGCACACCGCTGTTCCGGCAGCCGGGAAGGCGCCGGCGAGCGATGCCGGCACGACGCCGCCGGCTGCTGCCGCCGTCGTGACGCCGCCCGCACCGGCACCGAGCGGAGGGGCGCTGCAAGGTGTCATCGACACGGCGTCCGACGCCGGCCAGGCTGTGGCGCTGCCACCCATCTCCGTTCCACAGATCACGACGCCGGCCGTGACCCTGCCGGTCGAGCTACCGGCGGCTCCCCAGATCCACATTCCCTAG
PROTEIN sequence
Length: 357
VSALAAAPPRSDAASHEAYAERLYERHQRAIFGFCLKQLRRREDADDAVQTTFIYALLSLRRGIVPQFELPWLLTIARNVCSTRRRSGMRRGAYETPQDLDLLQDTLASPERSGEATAEELRMAVSSLPESQRKALLLREWRGFSYDEIGSELGLSQAATEALLFRARQNVAQRLGAGLKTLQGIPLLTFLRGLLQSAAAKTVAVGAATALTVVTVPAAERALSASTPTPRPAAHVAGTTTAVATPAVQVRPQARRRARPTQAHRVGATAARPRHTAVPAAGKAPASDAGTTPPAAAAVVTPPAPAPSGGALQGVIDTASDAGQAVALPPISVPQITTPAVTLPVELPAAPQIHIP*