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H2-18-all-fractions_k255_1992928_1

Organism: H2-18-all-fractions_metab_conc_34

near complete RP 43 / 55 MC: 7 BSCG 46 / 51 MC: 7 ASCG 11 / 38 MC: 1
Location: comp(3..269)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PUZ4_KRIFD similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 85.0
  • Bit_score: 72
  • Evalue 1.80e-10
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 85.0
  • Bit_score: 72
  • Evalue 5.10e-11
RNA polymerase {ECO:0000313|EMBL:KJK59545.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 79.0
  • Bit_score: 72
  • Evalue 2.50e-10

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Taxonomy

Saccharothrix sp. ST-888 → Saccharothrix → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 267
GTGCCGAGCGAGGTGCAGTCGCTGTACGAGCGGCACTACCTGCCACTCGTCCGGCTCGCCGTGCAGCTCGTGGACGATCTGCATTCGGCCGAGGACGTCGTGCAGGACGTGTTCGCCGCGCTGCGGACGGCGCCGAACGACCCGGAACGCTATCTGCGCCGTGCCGTGGTCAACCGGGCAGGCTCGACGCTGCGGCGACGCCGGGTCGCCCGCGGCTTCTTGGCGCGCGGCGTCCGCCTCGAGGACGTCGAGGCCGCCGACGGCGAC
PROTEIN sequence
Length: 89
VPSEVQSLYERHYLPLVRLAVQLVDDLHSAEDVVQDVFAALRTAPNDPERYLRRAVVNRAGSTLRRRRVARGFLARGVRLEDVEAADGD