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H2-18-all-fractions_k255_2385857_10

Organism: H2-18-all-fractions_metab_conc_34

near complete RP 43 / 55 MC: 7 BSCG 46 / 51 MC: 7 ASCG 11 / 38 MC: 1
Location: comp(9005..10171)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FED5_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 27.1
  • Coverage: 417.0
  • Bit_score: 110
  • Evalue 2.60e-21
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 30.1
  • Coverage: 386.0
  • Bit_score: 116
  • Evalue 1.30e-23
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 38.1
  • Coverage: 189.0
  • Bit_score: 121
  • Evalue 2.10e-24

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
GTGGCCGCAGTCCCGTCCATAGGTCGAGCAACTCGTGTCGAGCGTTCCGACGCCGCCGGTGCTGCCGCGGCCGGAGATCTGTACGAGCGCTACTCGGGCCAGATCTATGGGTATTGCCTGCACCAGCTCGGCTCGCGAGAGGAGGCCGAGGACGCGGTTCAGACGACGTTCATGAACGCGTTCCGCGGCCTGCAGCGCGGGATCGTTCCCGAGCTCGAGTCGGCCTGGCTGTTCAAGATCGCGCACAACGTGTGCCTGTCGCGCCGCCGCTCGTCATGGCGCCGCGGGCGCGTCGAGGCGCCGAACAACTTCGAGGTACTGCAGGAGATCGTCCCGGGCCGCGAGCATGCCGCCGACGAGCTGATCCGCCTGCAGGACGTCCTCGAGCAGATGCCGGAGAACCAGCGGCGCGCCATCCTGCTGCGCGAGTGGCAGGGGCTGACGTACCGCGAGATCTCCGACGAGTTGGGTCTCTCTCAGGCCGCCGTAGAGACCCTGATCTTCCGCGCTCGCCGCGCTTTGGCTCAGGGCCTGGAGCAGGACGCGGTCACGTGGAAGAAGCGGCTGCGCCGTGGCGCTGACGTGGGCGGCGTAATCGCTTGCGTGAAGACGCTCCTCGGCGGCGGCGGTGCAGCCGCTATCAAGATCGGGACGACGACGGCGATCGTCGCTGCCACCGCTGTGGCCGCGGCGACAGCGCCGATCGCGCCGAAGCACGCGAGCGCGTACCGCGCGCATGCGGCGAAGAGCGCGAAGCCGGTCGCGGCGGCGGTAACGCCCGCGCGGACGGTCTCGTCGTCCCACAACGTTTCGCACACGGTGCGTCGTGTGCCTGTTGCCGCGGCGCCTGCGCCAACGCCTTCTGCGGCGCGCGTGCACGCCGCGGCCGGCGCTGTGCACGCGCCCGCGTCGGCGACGCCGTCCGTCGGGGCGCCGACGATCCCGGTCGAGTCGCCGGACCAGCCGGCGCCCGCGGCCGCGCCGCCGGCTGCGCAGGTCGAGTCGGCTCCACCGGCGCCTGCTCCTCCGACGCCGGACTCGCAGTCCACGCCGCCGATTCCGCCGGCCGATCCCGGGCCGCCTGCGGACCAGCAGCCGCCGTCCGAGAGTCACGGCAACAAGCCGGACAAGCAAAAGCCCGACAACGGGCACGGCAACGGGAAGTAG
PROTEIN sequence
Length: 389
VAAVPSIGRATRVERSDAAGAAAAGDLYERYSGQIYGYCLHQLGSREEAEDAVQTTFMNAFRGLQRGIVPELESAWLFKIAHNVCLSRRRSSWRRGRVEAPNNFEVLQEIVPGREHAADELIRLQDVLEQMPENQRRAILLREWQGLTYREISDELGLSQAAVETLIFRARRALAQGLEQDAVTWKKRLRRGADVGGVIACVKTLLGGGGAAAIKIGTTTAIVAATAVAAATAPIAPKHASAYRAHAAKSAKPVAAAVTPARTVSSSHNVSHTVRRVPVAAAPAPTPSAARVHAAAGAVHAPASATPSVGAPTIPVESPDQPAPAAAPPAAQVESAPPAPAPPTPDSQSTPPIPPADPGPPADQQPPSESHGNKPDKQKPDNGHGNGK*