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H2-18-all-fractions_k255_3265588_12

Organism: H2-18-all-fractions_metab_conc_34

near complete RP 43 / 55 MC: 7 BSCG 46 / 51 MC: 7 ASCG 11 / 38 MC: 1
Location: comp(10095..10616)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZV5_ANATU id=5225532 bin=16ft_combo_ws3_JS1 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 41.1
  • Coverage: 146.0
  • Bit_score: 90
  • Evalue 1.60e-15
DNA-directed RNA polymerase subunit sigma similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 152.0
  • Bit_score: 100
  • Evalue 2.60e-19
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:AIY17452.2}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.8
  • Coverage: 152.0
  • Bit_score: 100
  • Evalue 1.30e-18

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Taxonomy

Pimelobacter simplex → Pimelobacter → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 522
GTGCGGCCGCGCGATCCGCTGGCAAATCCGGAGCAGCTGATCCGGCGGGTCTACGCGTACGTCGCGTACCGCATCGGCGACGGGCCCGACGCGGAGGACGTCACGAGCGAGACCTTCGAGCGGGCCCTTCGTTACAGGGACAGCTACGACAGGACGAAGGGTGAGCCGGCCGCCTGGCTGATCGGCATCGCCCGGCGATGCCTCGCCGGGGCGGCGTCGACTCGGCCCGTGCCGACGGCGGCGATCGTGGAATCGCCGGCGGCGGGCGACCTCGAGGAGGACACCGTGCGCAGACTGACGATCGCTCACGGCTTGCAGAAGCTCAGCGATCGCGACCGGGAGCTGCTCGCTCTGCGCTACGGGGCCGACCTCGCTGTCAACGCCATCGGCGAGCTGCTCGATCTTCGCCCGAATGCCGTAGACGTGGCGCTGCATCGGGCGCGCGAGCGGCTCGCCGAGATCCTGGCCGGCGGGGGTGGCGGGGAATCTCCAGAAGCCGGCAGGGAGGCTGTAAGGATCTGA
PROTEIN sequence
Length: 174
VRPRDPLANPEQLIRRVYAYVAYRIGDGPDAEDVTSETFERALRYRDSYDRTKGEPAAWLIGIARRCLAGAASTRPVPTAAIVESPAAGDLEEDTVRRLTIAHGLQKLSDRDRELLALRYGADLAVNAIGELLDLRPNAVDVALHRARERLAEILAGGGGGESPEAGREAVRI*