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H2-18-all-fractions_k255_5706501_18

Organism: H2-18-all-fractions_metab_conc_34

near complete RP 43 / 55 MC: 7 BSCG 46 / 51 MC: 7 ASCG 11 / 38 MC: 1
Location: comp(13545..14162)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAA2_SPHTD similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 182.0
  • Bit_score: 147
  • Evalue 1.00e-32
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 182.0
  • Bit_score: 147
  • Evalue 2.90e-33
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 178.0
  • Bit_score: 230
  • Evalue 1.30e-57

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGGGCGTCTATGCCTTGCCAACGGCCATGCCCCTCGAGGCACGGAAGGAAGCGGCTCCGCGGGAGCCGTTCCTCGACGACCCTTCGGTCAGCGACGGCGACCTGATCCGGCGGATCGCGCGGCGTGACGCGAACGCATTCGAGGCCCTCTACCGGCGCTTCGCGCGGCCCGTTTTCGGCCTCGCCCTACGGCGGCTCGGCGACCGGATGAATGCCGAAGACGCCGTGCAGGAGACTTTCGCCGCAATCTGGCGGTCCGCGCGCACCTACAAGCCGGAGCGTGGACCGGGTGCGCCGTGGTTGTACGCCGTCGCCCGGAACGCGATCGTCGACCGCAGCCGCGGCCGCAGCGAGCCGCCGGGCGAGGGGCCCGAGCTTCCGTCCGACGAGCCGTCGCCGGCGGAGCGCGCCGAGACGTCGTACACGGCCTGGCGCGTTCACCGCGCGCTCGAGACGCTGGGCCCGAACGAGCGCGAGGTGATCGAGCTCGCCTACTACGGAGGGCTCTCCCAGAGCGAGGTCGCCGACTACCTCAACATCCCGCTCGGCACCGTCAAGACGCGCACGCGCGCAGGCCTTGGCCATCTCGCCGACCAGCTCGAAGGAGAGGTGAGATGA
PROTEIN sequence
Length: 206
MGVYALPTAMPLEARKEAAPREPFLDDPSVSDGDLIRRIARRDANAFEALYRRFARPVFGLALRRLGDRMNAEDAVQETFAAIWRSARTYKPERGPGAPWLYAVARNAIVDRSRGRSEPPGEGPELPSDEPSPAERAETSYTAWRVHRALETLGPNEREVIELAYYGGLSQSEVADYLNIPLGTVKTRTRAGLGHLADQLEGEVR*