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H2-18-all-fractions_k255_5833300_2

Organism: H2-18-all-fractions_metab_conc_34

near complete RP 43 / 55 MC: 7 BSCG 46 / 51 MC: 7 ASCG 11 / 38 MC: 1
Location: comp(865..1524)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F144_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 208.0
  • Bit_score: 258
  • Evalue 3.30e-66
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 208.0
  • Bit_score: 258
  • Evalue 9.40e-67
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 220.0
  • Bit_score: 361
  • Evalue 6.70e-97

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGGCCGCACGGCCCGCAGCCACAGCCGCGCAGAAGGCCCAGCGAGAGCTCGAAGACCTACAGCTCGTCATCCGCGCCCGCAACGGGGACAGCGGCGCGCTGGACGTCCTGATCCGCCGCTACACCGGCTTCGTCCGGCTGAAGGCGAGCTCGTACTTCCTCGCCGGCGGGGACTCGGAAGACCTCGTCCAGGAGGGCCTGATCGGCTTGTACAAGGCGGTTCGCGACTTCAAGGCCGACAAGGAGACCTCGTTCAGGAGCTTTGCGGAGCTGTGCGTGACGCGCCAGATCATCACGGCGATCAAGACGGCCACCCGCTTCAAGCACGCCCCGCTGAACACCTACGTCTCGTTCAGCCACACCCCGGCGGGCCAGGAGTCGGACGGCGAATGCACCCTCGGCGACGCCCTGCCCGGGCCCGGCGTCGACGATCCCTCCGTTTGTGTCATCTCCACGGAGGAGCTCCAGAGCTTAGTCTTCACCCTCGGAAGCGGACTCTCCCAACTAGAAGCCGATGCTTTACGTCTCTATTTGGAGGGATCGTCCTACGAGGAGATGGCTGAGGAGTTGGGCTGCGACACGAAGACGATTGACAATGCGCTCCAGCGGGTTAAAAGAAAGATCTTGACCCACCAGAAATCCAGGCAAGTCCTGCTGTAG
PROTEIN sequence
Length: 220
MAARPAATAAQKAQRELEDLQLVIRARNGDSGALDVLIRRYTGFVRLKASSYFLAGGDSEDLVQEGLIGLYKAVRDFKADKETSFRSFAELCVTRQIITAIKTATRFKHAPLNTYVSFSHTPAGQESDGECTLGDALPGPGVDDPSVCVISTEELQSLVFTLGSGLSQLEADALRLYLEGSSYEEMAEELGCDTKTIDNALQRVKRKILTHQKSRQVLL*