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H2-18-all-fractions_k255_3296644_2

Organism: H2-18-all-fractions_metab_91

partial RP 25 / 55 BSCG 27 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(314..934)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J9T6_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 208.0
  • Bit_score: 214
  • Evalue 5.20e-53
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 208.0
  • Bit_score: 214
  • Evalue 1.50e-53
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADP84589.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 208.0
  • Bit_score: 214
  • Evalue 7.30e-53

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGACCGCCGTGGACACCACCGGCGACGCACGGCTGGTCGAGGCGCTGCGAGCCGGCGACGAGCAGGCCTTCGAGCAGCTCGTGCTGCGCTACCACGCGGTGCTGCTCCGTCTCGCGCGCAACTATGTCGCGTCCGCCTCGGTCGCCGAGGAGGTCGTGCAGGACACGTGGGTCGGGGTGCTGGACGGGATCGACCGCTTCCGCGGTGCCTCGTCGGTCAAGACGTGGATCTTCCGCATCCTCGTCAACCGCGCAATGACGCGCGGCGTTCGCGAGCGCCGCACGGTTCCGTTCTCCTCGCTGCAGACGGCGGAGGGCGACGACGGCCCGACCGTGAGCGCCGATCGCTTCACGGCCGACGGCAGCTGGGCGGTCGCGCCCCGTCCGTTCGAGCTGCCCGAGGACCGCGTCGGCTTGCTCGAGCTGCGAGCGCGGCTGCGCGAGGCGCTCGCCGACCTGCCCGAGCGCCAGCGGATAGTCGTCGGCCTGCGCGACGTCGAGGGCCTCTCCTCCGAGGAGGTCTGCGACCTCCTCGATCTCTCGGCCGAGAACCAGCGCGTCCTGCTCCATCGTGGTCGCGCCCGCCTGCAGGCCGCGCTCGCCGGCTATCAGGCTCCGTAG
PROTEIN sequence
Length: 207
MTAVDTTGDARLVEALRAGDEQAFEQLVLRYHAVLLRLARNYVASASVAEEVVQDTWVGVLDGIDRFRGASSVKTWIFRILVNRAMTRGVRERRTVPFSSLQTAEGDDGPTVSADRFTADGSWAVAPRPFELPEDRVGLLELRARLREALADLPERQRIVVGLRDVEGLSSEEVCDLLDLSAENQRVLLHRGRARLQAALAGYQAP*