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H3-16-all-fractions_k255_1251076_26

Organism: H3-16-all-fractions_metab_conc_110

near complete RP 40 / 55 BSCG 42 / 51 MC: 1 ASCG 10 / 38
Location: comp(15034..15639)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWR9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 200.0
  • Bit_score: 211
  • Evalue 5.60e-52
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 200.0
  • Bit_score: 211
  • Evalue 7.80e-52
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 187.0
  • Bit_score: 179
  • Evalue 8.70e-43

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 606
ATGCCGGCTGAGGATTCGACCACGAACGGCCGCACCCCGGAAGACGCGGAGGATATCCGGCTGATGCAGCTGGCTGGCACCGGCGATACGGCCGCGTTCGAGCAAATCGTTGAACGCCATCAGCGGCTCGTGGTTGGCACGGTCGGCCGCATGCTCGGCACGAGTGCGGACGCCGATGATATTGCGCAGCAGGTTTTTCTGCGGGTCTGGAAAAACGCGAATCGCTATGTTCCGCAGGCGAAGTTCACAACCTGGTTGCTCAAGATTACCCGCAACCTTGTTTTCAATGAACTGCGCCGCCGCATGCGTCACCCGCAGGTTCCACTCCAGGGAGAAACAGAAGAAGAAGAGCGGCCGCTGAAGGACGAACACGCGATCGCGCCGGATGCCTCGTTATTGGAAGGCGAGCTGCAAAAGGCTGTGGATGCTGCGATCGCTCAATTGCCTGAGACGCAGCGAATGGCTGTCATTCTCCGCCGTTACGAGGAACTCAGTTATGAGGAGATCGCGGAGACGCTCGACCAGTCCGTGTCGGCCGTGAAGAGTCTGCTCTTTCGGGCGCGGACCGAGCTGCGCGCGGCGCTAAGCCGATATTTGGCGGGATGA
PROTEIN sequence
Length: 202
MPAEDSTTNGRTPEDAEDIRLMQLAGTGDTAAFEQIVERHQRLVVGTVGRMLGTSADADDIAQQVFLRVWKNANRYVPQAKFTTWLLKITRNLVFNELRRRMRHPQVPLQGETEEEERPLKDEHAIAPDASLLEGELQKAVDAAIAQLPETQRMAVILRRYEELSYEEIAETLDQSVSAVKSLLFRARTELRAALSRYLAG*