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H3-16-all-fractions_k255_2892245_5

Organism: H3-16-all-fractions_metab_conc_110

near complete RP 40 / 55 BSCG 42 / 51 MC: 1 ASCG 10 / 38
Location: comp(3247..6420)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 1074.0
  • Bit_score: 1217
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CX01_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 1074.0
  • Bit_score: 1217
  • Evalue 0.0
mfd; transcription-repair coupling factor mfd (superfamily II helicase) similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 1028.0
  • Bit_score: 851
  • Evalue 1.60e-244

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 3174
GTGGAAGAATCGGCCCACGATCAACTTCCTTCCATCGTAGCGCAGGCTGGTCCGATCTCGCAGAAAATCCGCGCGATCGCGGGAGGCCTACGCCCTGTCACCTTTTCGCACGTCTCCGAACCTGCCCAGGCCCTCCTGGTCGCCGCCCTTGCCCGCGAAATTTCGAAAACGATTTGGATTCTATGTCCGAACATCCGATCCCAGGAGCTGCTTTATGAAAGTTTGCTCAACTGGCAGCCGAACGCGCTCTTTCTTCCCGAGGCCGAAATCGCGGCTGTCGAAAACATCCTGCCCGACCCGGAAATCGCGGCGGAACGGCTGGCCTTACTCAACCGCGTTCAACGCGAGAAAGGTACGCACCTGATCGTCGCCACGCGCGCGGCACTCGAGCAAACGGCTCCGGACCCGGCGTCCCTGAATGCAGCGGTGCTCCTTCTGCGTCGGGGTAAACAAAATCCACTGGAGCGCATCATCACAGCGCTTACCGCTGCAGGTTACGAACGCGTTGCCCAAGTCACTACGCGGGGCCAGTTTGCCGTGCGCGGGGGCATTCTCGACATATTTTCTTGGCAGGCGTCGCGGCCAATCCGAATCGAGTACTTTGGCGACGACGTCGAATCGCTCCGGGAATTCGACGTCGATACCCAAACGTCGCTCCGCAATCTGCAAAGCGTCGAAATCCTGCTCGAAGCGGCCGAGACTCAAAACGCTTTCGTCCGCGATTATGTCGGCGCCGATCATTTGCGGCTCGCGATCGAACCCGGCGAAGACGAGACCGACGCCGAAATTCTGGTGGCCGAGGCATGGCTCGGGGGAAACGAGCCGGAAGATTTCCACGGTGCTTTCGACGATTGCGACATTGGCGATTTTGCCGTCGGCGATTTCATGCTGGTGGAAGCGAAGCGCAGCCAATTCGCCGCCCGCTTGCGCGACTGGAGCGCCGGTGAATTTCAAGTCGTCATTTATTTCCAGACCGAAGGCGAGATCGAGCGCTTCCGCGAAATCATGGGCGACGCCATCGCCGGGATCGAGCTTCGGGAAGGCACCCTGCCGCGTGGATTTGTTTTTCCCGATGGAAAACTGGTTGTCCTATCCGGCGCCGAATTGTTCGGGCGCTATACCACGCATGGGAGACGACGTCTCCAGCGCGCCGAGCAACTCAGCCGCAACCGCGCCCAAATCGATTTCAGCGAGCTCAATGAGGGGGACCTCGTCGTTCACCTCGAACACGGAGTCGGTCGTTTCCTTCAGCTGACCCGCGTCCCTTCGCCGGCCGGGGAGATGCAGGAAGCGCTCGCTCTTGAGTTCGCGAACGATGCCCGACTCTACGTTCCGCTCGAACAGGCGTATCTCGTCTCGCGCTACGTCGGGGTCGGGAAAAAATCTCCGGCCCTGAGCTCGCTGGCGGATGCGAAATGGGCCCGGGCGAAGAAAAATGCTGCCGCTTCCATCTTCGATTACGCCGGGAAAATGCTCGCGGTCCAGGCGGAGCGTGAAACCCAAATCGGGCACGCTTTCGGTGCGGACACAAAATGGCAGCGTGAGTTCGAGCATTCGTTTCCCTTTCGCGAGACTCCCGACCAGCTCACCGCCATCGCCGCCACCAAGAACGACATGGAACGCGCGCGGTCGATGGACCGGCTCATCTGCGGCGATGTCGGGTTTGGCAAAACCGAGGTCGCAATTCGGGCGGCGTTCAAGGCGGTCATGGAAGGAAAACAAGTAGCCGTTCTCGCTCCCACCACGGTGCTCGCCCAACAGCACTTCGAAACGTTCCGGCAACGGATGCTCGATTACCCGGTCCGCATCGAAATGCTGAGTCGGTTTCGCTCCCACGGTGAACAACGCAAAGTCCTGGGCCTGCTCCGCGAAGGCGGCGTCGACATCGTTATCGGTACCCACCGCCTCATTTCAGGCGACGTTGTTTTCAAGGACCTCGGGCTGGTCGTGATCGACGAGGAACAGCGCTTCGGCGTCCTTCACAAGGAGAAGTTCAAGGAACTCTTCAAGCTCGTCGACGTACTCACGCTCTCGGCCACGCCCATTCCGCGCACGCTCTATCTCTCGCTCGTCGGAGTCAAAGATATGTCCACGATCGAGACCCCGCCGCTGAACCGCCTTCCGGTCGAGACCGTCGTCTGCGGCTACGACGAACGAATTATTCGCGATGCCATCAACCGGGAGCTCGACCGGCAGGGCCAGGTTTATTTCCTCCACAACCGCGTCCAATCCATCGAGAAGATGCGGGAGAAAATCGCCGACCTATGCCCGCGCGCCCGGGTGGAGTTCGGCCACGGCCAGATGGATGCGGACGAATTGGAATCCGTCATGGGCCGGTTCGTTTCTGGAAAGATCGACGTCCTGGTCTGCACGACGATTATCGAGAGCGGCCTCGATATCCCGAATGCCAACACGATCATCATCGATCGGGCCGACCGGTTCGGGCTCGCCGACCTGTATCAACTTCGTGGCCGGGTTGGCCGCGCCGAGCACAAGGCTTATGCCTACCTGATGTTGCCGCGCGAGATGATGACGGTCGGCGCCGCCCGCAAACGAATTAACGCGATCAAGCAATACAGCTCGTTAGGCGCCGGTTTTCGAATTGCGATGCGGGACCTCGAGATCCGCGGCGCAGGCAGTATTCTCGGCACCGCCCAAAGCGGACACATCGTGGCGGTCGGCTTCGACCTTTACTGCCAGCTCTTGAAGCAGGCAGTCGCGCAGCTCAAGGGCGAGAAGTCACGGGCCCGGCTCGAGGTCGATGTGCGGCTCGATTTCGTCGCAACAAACGAAGCGGACTTCGTGAAGCTCGGCCCGGCGACCCGGGTTCCCGCATTTATCCCGACAAGCTATGTCCTGGATCCGACCCTGCGGATCCAGGCTTACCGGCATCTCGCTGAAATCAGCACGCGCGAGCAGCTTGACCGGCTTCGCAAGGAATGGCGGGACCGTTTTGGGAAGTTCCCCCAAGCGGTTGACAACCTTCTTCTTCTAGCCGAAATCAAGCTCTCTGCGGCCCGCGCCAGCCTCGCTCGAGTCGAGGTCCGCGAACGGAAATTAATGCTCACCCGCCGCGGAGATTTTATACTTGTGGGAGGCAAATTCCCTCGCATAAGTACCGATAGAATCGAGCGCCAACTCACCGAAGTTTTGGAATTGATCCGGAAGATTTAA
PROTEIN sequence
Length: 1058
VEESAHDQLPSIVAQAGPISQKIRAIAGGLRPVTFSHVSEPAQALLVAALAREISKTIWILCPNIRSQELLYESLLNWQPNALFLPEAEIAAVENILPDPEIAAERLALLNRVQREKGTHLIVATRAALEQTAPDPASLNAAVLLLRRGKQNPLERIITALTAAGYERVAQVTTRGQFAVRGGILDIFSWQASRPIRIEYFGDDVESLREFDVDTQTSLRNLQSVEILLEAAETQNAFVRDYVGADHLRLAIEPGEDETDAEILVAEAWLGGNEPEDFHGAFDDCDIGDFAVGDFMLVEAKRSQFAARLRDWSAGEFQVVIYFQTEGEIERFREIMGDAIAGIELREGTLPRGFVFPDGKLVVLSGAELFGRYTTHGRRRLQRAEQLSRNRAQIDFSELNEGDLVVHLEHGVGRFLQLTRVPSPAGEMQEALALEFANDARLYVPLEQAYLVSRYVGVGKKSPALSSLADAKWARAKKNAAASIFDYAGKMLAVQAERETQIGHAFGADTKWQREFEHSFPFRETPDQLTAIAATKNDMERARSMDRLICGDVGFGKTEVAIRAAFKAVMEGKQVAVLAPTTVLAQQHFETFRQRMLDYPVRIEMLSRFRSHGEQRKVLGLLREGGVDIVIGTHRLISGDVVFKDLGLVVIDEEQRFGVLHKEKFKELFKLVDVLTLSATPIPRTLYLSLVGVKDMSTIETPPLNRLPVETVVCGYDERIIRDAINRELDRQGQVYFLHNRVQSIEKMREKIADLCPRARVEFGHGQMDADELESVMGRFVSGKIDVLVCTTIIESGLDIPNANTIIIDRADRFGLADLYQLRGRVGRAEHKAYAYLMLPREMMTVGAARKRINAIKQYSSLGAGFRIAMRDLEIRGAGSILGTAQSGHIVAVGFDLYCQLLKQAVAQLKGEKSRARLEVDVRLDFVATNEADFVKLGPATRVPAFIPTSYVLDPTLRIQAYRHLAEISTREQLDRLRKEWRDRFGKFPQAVDNLLLLAEIKLSAARASLARVEVRERKLMLTRRGDFILVGGKFPRISTDRIERQLTEVLELIRKI*