ggKbase home page

H3-16-all-fractions_k255_7358951_10

Organism: H3-16-all-fractions_metab_43

partial RP 17 / 55 MC: 2 BSCG 19 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(9129..9695)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 184.0
  • Bit_score: 164
  • Evalue 1.00e-37
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037E715C similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 188.0
  • Bit_score: 255
  • Evalue 4.10e-65
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 184.0
  • Bit_score: 164
  • Evalue 2.10e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Solibacter usitatus → Candidatus Solibacter → Solibacterales → Solibacteres → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGAGAATCTTCACGGCCATTGATCTGCCCTCCACGGCCCTGTTACGGCTGGAGCGGCTCTTGAGCGTTCTGCGTCCCGAGGCGCAGATTAATTGGAGTCCGCTGGACAACCTCCATATCACGACAAAATTCATCGGGCAGTGGCCCGAAGAGCGGTTCCCGGAATTGACAAACGCCCTGTCCTCACTGTTACCTTGCCGACCATTCCAAGTCGAGTTAAAAAATCTAGGCTGGTTTCCGAATGGCCGTTCTCCGCGTGTATTGTGGGTAGGGGTTCATGGCGGCGATGGGCTGGCCGAGCTGGCTCGGAGAACAGAAGAGAAGCTGCAGGAGTTGGGAGTACCAAAAGAGAGCCGGGAGTTTAGTCCACATCTTACGCTGGCGCGTATCAAAAGGCCTGTTTCCCTGTCCAGGCTCAAGCAGATCGTCGGTGAGATAGAATCGGCCGAGTTCGGCGAGTTTCCTGTGTCCTCCTTTGCTCTGTTCCGCAGCGATCCAGGGTCAAATTCAAGCATTTACCGGAAGCTGCGCGATTTCCACTTCCAAGCGGCCATGGCCGCCTCGTAA
PROTEIN sequence
Length: 189
MRIFTAIDLPSTALLRLERLLSVLRPEAQINWSPLDNLHITTKFIGQWPEERFPELTNALSSLLPCRPFQVELKNLGWFPNGRSPRVLWVGVHGGDGLAELARRTEEKLQELGVPKESREFSPHLTLARIKRPVSLSRLKQIVGEIESAEFGEFPVSSFALFRSDPGSNSSIYRKLRDFHFQAAMAAS*