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H3-16-all-fractions_k255_3950011_12

Organism: H3-16-all-fractions_metab_44

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 MC: 4 ASCG 14 / 38
Location: comp(13564..14775)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 398.0
  • Bit_score: 646
  • Evalue 1.50e-182
Transcription-repair-coupling factor n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11PH6_CYTH3 similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 403.0
  • Bit_score: 609
  • Evalue 1.80e-171
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 403.0
  • Bit_score: 609
  • Evalue 5.20e-172

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Taxonomy

Sporocytophaga myxococcoides → Sporocytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1212
CCCAGGACGCTTCATTTTTCCCTGATGGGCGCCAGGGATCTTTCTATTATCGCGACGCCTCCTCCGAACAGACAGCCGGTAACCACAGAAATACATGTGTTCAATGATGTAATCATCCGCGATGCGGTAAGCTATGAATTAAAAAGAGGTGGGCAGGTTTTCCTGGTCCATAACCGGGTGAAAGACATAGAGGAAATAGCCGACAAAGTGCTGAGGCTGGTGCCCGATGCAAAAGTTGGTATAGCTCATGGACAGATGGAAGGAGAGCAGCTTGAAAAAGCCATGATGAAATTTGTGGAAGCCGAATACGATGTGCTGGTCTCTACGAATATTATTGAATCGGGTCTTGACATTCCGAATGCCAATACCATTATCATTAACAGCGCCCATATGTTCGGACTTTCGGATCTGCATCAGATGAGAGGACGCGTGGGACGCTCGAATAAAAAAGCGTATTGCTATCTTCTGACACCTCCGGTGGCCACACTGCCATCTGATTCCAGAAAAAGACTCAGTGCCCTGGAAGAATTCTCCGAGCTTGGCGACGGATTTAAAGTGGCGATGCGGGATCTGGATATACGCGGAGCAGGAAATCTGCTGGGCGCCGAGCAGAGCGGCTTCATTTCTGATCTGGGCTTTGACATGTACCACAAAATTCTGGATGAAGCGATCCAGGAATTAAAGGAAACCGAGTTTAAGGAGCTTTTCAGAAAAGAGCTGGAAATGAAGGATCTGAAAACCCTGGTGAACGACTGTGTGATTGAAACAGATCTTGCCGTATTGATCCCTGATAAATACGTAAGCAATATTTCAGAACGTCTGAACCTCTATTCTTCGCTCGACAGTCTGAAGAACGAAGAAGAACTGGAGAAATTCAGAGCCTCGATGGTTGATCGGTTCGGTCCGCCTCCTCAGGAAGTAACAGACCTGATGGAAACCGTGAGACTAAGGTGGATTTCCGAACAGCTGGGCTTTGAAAAGCTGACCTTGAAGAATGATACCCTGAAAGGCTATTTTGTACCGGCCGACCGGGAAGAGTATTATAAGTCAGAAGTATTCGGACAAATACTCAAATTCGTCAAAGACCACCCTAAAAAGTGCAGGTTGAAGGAGATCAATAAAAAGCTTATCCTGGTGATGGATGATATTGAGTCTATTCCCAAGGCTCTGGAGCTTCTTGGGGAAATAAGTCCGAAAAAGAGCTTGGCATGA
PROTEIN sequence
Length: 404
PRTLHFSLMGARDLSIIATPPPNRQPVTTEIHVFNDVIIRDAVSYELKRGGQVFLVHNRVKDIEEIADKVLRLVPDAKVGIAHGQMEGEQLEKAMMKFVEAEYDVLVSTNIIESGLDIPNANTIIINSAHMFGLSDLHQMRGRVGRSNKKAYCYLLTPPVATLPSDSRKRLSALEEFSELGDGFKVAMRDLDIRGAGNLLGAEQSGFISDLGFDMYHKILDEAIQELKETEFKELFRKELEMKDLKTLVNDCVIETDLAVLIPDKYVSNISERLNLYSSLDSLKNEEELEKFRASMVDRFGPPPQEVTDLMETVRLRWISEQLGFEKLTLKNDTLKGYFVPADREEYYKSEVFGQILKFVKDHPKKCRLKEINKKLILVMDDIESIPKALELLGEISPKKSLA*