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H3-16-all-fractions_k255_2111619_1

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: comp(16..1065)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJZ6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 326.0
  • Bit_score: 364
  • Evalue 1.20e-97
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 326.0
  • Bit_score: 364
  • Evalue 1.60e-97
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 327.0
  • Bit_score: 335
  • Evalue 1.30e-89

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1050
ATGATGAAAATACCAATTGCATTGCAAGGACGCCGGGCGGCGGAAGTTGTCCGTGCGTTGGGAACCAAGAAAACGGCGAAAAATCGGCGGCCACGTAGGAGTCATGTGGATTCCGAGGTGACGCAGGTAACAGTTGCTGCTCCGGCGGCGCTGGCGAGAGTGACCGCGGAACCGGCACAGCCTTTAGAGGCCCCGGCGACGAACGGCGATTCATTGCAGCTTTATTTGCGCGAGATCGGCCAGGTGAAACTGTTGACGCCGGAAGAGGAAATCACGCTGGCGAAACGCATCAAGCGCGGCGACAAAAAGGCGCGTGAGCACATGATCAAGGCCAACCTGCGCCTGGTCGTGAAGATTGCGCGCGACTATGAAAATCTCGGCTTGCCGCTGCTCGATCTTATCAATGAAGGCAATATCGGCCTTATGAAGGGTGTGGAGCGGTTCGACCCGAGGAAGGGCGCGAAGCTTTCCACGTATGCGTCGTGGTGGATCAAGCAGGCCATCAAACGGGCGCTGGCGAACCAGTCGAAGACGATTCGCTTGCCGGTGCACGTGGTGGACAAGGTCGCGCATATCCGTCGCGCGGAGATGAAGCTGCGCGAGGCGTTGGATCGCGAACCGACGGATGAAGAGGTCGCGAGCGAGCTGGGCCTCGATGCGCGGCGGGTGAGGCGTTATCGCCTGGCTTCGAGGGCGCCGGTGTCATTGGATGCACCGTTGGGCGATGATGATACCGAGCGGGTTTCAGAAGTTGTGGCGGACCCGAATGCAGTGTTGCCTTCGGATTCGCTGGTCCAGAACAGTGACAACGCATTGATGCAGGAAATTCTGGCAACGCTGCCGGAACGCGAGCGGGAAATTCTGGCGATGCGCTTTGGGTTGAACGATGGGACCGAGCGGACGCTGGAGGAAGTCGGCGAACGCTTCGGCGTGACGCGCGAACGCATTCGTCAGATCCAGGAGCAAGCGCTGAAGACTATCCGAAAGGCGATGGAGAAACGGGACCGGCCTTCGGTGGAGGAGTCGGAACCGCTGGCAGTGGCGGCGTAA
PROTEIN sequence
Length: 350
MMKIPIALQGRRAAEVVRALGTKKTAKNRRPRRSHVDSEVTQVTVAAPAALARVTAEPAQPLEAPATNGDSLQLYLREIGQVKLLTPEEEITLAKRIKRGDKKAREHMIKANLRLVVKIARDYENLGLPLLDLINEGNIGLMKGVERFDPRKGAKLSTYASWWIKQAIKRALANQSKTIRLPVHVVDKVAHIRRAEMKLREALDREPTDEEVASELGLDARRVRRYRLASRAPVSLDAPLGDDDTERVSEVVADPNAVLPSDSLVQNSDNALMQEILATLPEREREILAMRFGLNDGTERTLEEVGERFGVTRERIRQIQEQALKTIRKAMEKRDRPSVEESEPLAVAA*