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H3-16-all-fractions_k255_4167236_12

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: comp(7273..8955)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 560.0
  • Bit_score: 848
  • Evalue 3.50e-243
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHC1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 560.0
  • Bit_score: 848
  • Evalue 2.50e-243
30S ribosomal protein S12 methylthiotransferase similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 300.0
  • Bit_score: 369
  • Evalue 1.60e-99

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1683
ATGAAACAAAATTCGGCAGAACGCCCCGTGCGCGTGGGCCTCATCTCCCTCGGCTGCGCCAAAAACCTGGTGGACGCCGAAATCATGCTCGGCTCACTCCTAAAAGACGGCCTCGAAATCACCAACGACGCCGCACAAGCCGATGTTGTCATCGTCAACACCTGCTCCTTCATCGACTCCGCGCAGGAAGAAAGCGTCGATACCATCCTCGAATCCGCCGAAGTCCGCGAAGCCAACAATCGCGGCCAGGGCCTCATCGTCTCCGGCTGCCTCCCCCAACGTTTCCGCGACGACCTTCCCAAACTCCTCCCCGAAGTGGACGCCTTCATGGGCATCGACCAGGTCGCCCAGGTCTCGGATATTGTCAGACAGGCCATCGCTCGACGCGCCGAAAAAGTCCAGGATCAAAAATCAAAAACTAAAAATCAAAAATCCAAGCTCGTCGCCCGTCTGGGTGAACTGGACAAAAACCGCCCCGCATCGGACCACGAAAAATCCGAATCCCTCCGCGGCACAAAAAATTTCGGCAACACCAAAACCGCACTCACGCCGCACGTCACACCTCACTCGCCAGTCTTAGAGGTCACCCAACGCCCGATTTTCATCCCCGATTTCAACACCCCGCGCTTTCGCCTCACGCCCCGTCATTTCGCTTACGTGAAAATCGCCGAAGGCTGCAACCACCCGTGCAGCTTCTGCATCATCCCGCGCATGCGCGGCTCCCACCGCAGCCGCCGGCAAAGCGATATCGTCGCCGAAGCCAAAGCCCTCATCGCCGACGGAGTCAAAGAGCTGAATCTGATTTCCCAGGACTCCACTTATTACGGATTGGATCTGCGCCCGAACCATAGCCGCGCGATTTCCTCACCGGAAAAATTTTCTGCGGCGGCCAAAGCCTTGCCCACGGATTCCACGACGATCTGCTCTCTGCTGCGCGAACTAAACGCGCTCGAAGGCGATTTTTGGATTCGCCTCCTCTACACCCATCCCGCGCATTGGACGGACGAACTTATCCAGACCATCGCTGAATGCCCCAAGGTCGCGCGCTACGTGGACATCCCGCTGCAGCACATTCACGAAAACATGCTCGAACGCATGCGCCGCGAAACCTCGCAGCAATACATCGTGGACCTCCTGAAAAAAATCCGCGCCGGCATCCCCGGCATCGCCCTGCGCACCACCTTCATCGTCGGCTTCCCCGGCGAAACTGATGCCTATTTTGAATCGCTTCTCGATTTCATCCGCGAAACCAAATTCGAACGCCTCGGTGTCTTCAGCTATTCGCAGGAAGAAGGCACGCGCGCCGGAGCCATGAGCGGCCAAATCCCGGAAAAGACCAGGCAAAAACGCCGCCAACTCGCCATGGCCGCGCAATATAAAATCGCGGTCCACGTGTCCGAATCCTTCGTCGGCCGCGACATCAAAGTCCTCGTCGAAGGCAAGGCGAACCAAAAACAACTCCAATCCGCCAACGTCAGCTCCTGGGAACACGGTCTGATGCGCGAAACAGAAACTAGAAACTCCAAACTCGAAACCGGAAACTATTTCGTGGCCCGCGGCGAAGCCGACGCCCCCGACATCGACGGTCGCGTTTACATCCGCGGCAAACTTCCCCTCGGCGAATTCGCCCCCGTCAAAATCATCGCCCACACCGACTACGATTTGATTGCCGAGCCGGCCTAG
PROTEIN sequence
Length: 561
MKQNSAERPVRVGLISLGCAKNLVDAEIMLGSLLKDGLEITNDAAQADVVIVNTCSFIDSAQEESVDTILESAEVREANNRGQGLIVSGCLPQRFRDDLPKLLPEVDAFMGIDQVAQVSDIVRQAIARRAEKVQDQKSKTKNQKSKLVARLGELDKNRPASDHEKSESLRGTKNFGNTKTALTPHVTPHSPVLEVTQRPIFIPDFNTPRFRLTPRHFAYVKIAEGCNHPCSFCIIPRMRGSHRSRRQSDIVAEAKALIADGVKELNLISQDSTYYGLDLRPNHSRAISSPEKFSAAAKALPTDSTTICSLLRELNALEGDFWIRLLYTHPAHWTDELIQTIAECPKVARYVDIPLQHIHENMLERMRRETSQQYIVDLLKKIRAGIPGIALRTTFIVGFPGETDAYFESLLDFIRETKFERLGVFSYSQEEGTRAGAMSGQIPEKTRQKRRQLAMAAQYKIAVHVSESFVGRDIKVLVEGKANQKQLQSANVSSWEHGLMRETETRNSKLETGNYFVARGEADAPDIDGRVYIRGKLPLGEFAPVKIIAHTDYDLIAEPA*