ggKbase home page

H3-16-all-fractions_k255_7730_3

Organism: H3-16-all-fractions_metab_maxb_73

partial RP 20 / 55 BSCG 26 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(4184..4339)

Top 3 Functional Annotations

Value Algorithm Source
MscS Mechanosensitive ion channel n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XV74_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 50.0
  • Bit_score: 68
  • Evalue 1.90e-09
mechanosensitive ion channel MscS similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 50.0
  • Bit_score: 68
  • Evalue 5.50e-10
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ACU03940.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 50.0
  • Bit_score: 68
  • Evalue 2.70e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 156
CGTACCGGTATCCTCGAACTTAACCCTGATGGGTATAAGGTCCTTGTTAATGTGTGGGCACCGGCACATGGTTTCAATGATACGAGGTTCCTTTTTCAGGAGCAGATCATGAAGGATCTCAAAGATGCGGGACTGAAGCTACCGGGGATGGTGTGA
PROTEIN sequence
Length: 52
RTGILELNPDGYKVLVNVWAPAHGFNDTRFLFQEQIMKDLKDAGLKLPGMV*