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H3-16-all-fractions_k255_8149849_18

Organism: H3-16-all-fractions_metab_conc_83

partial RP 35 / 55 MC: 6 BSCG 34 / 51 MC: 7 ASCG 10 / 38 MC: 1
Location: comp(13488..14438)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Novosphingobium sp. AP12 RepID=J2Q224_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 40.3
  • Coverage: 300.0
  • Bit_score: 195
  • Evalue 6.50e-47
Transcriptional regulator {ECO:0000313|EMBL:EJL34182.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.3
  • Coverage: 300.0
  • Bit_score: 195
  • Evalue 9.10e-47
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 320.0
  • Bit_score: 185
  • Evalue 1.90e-44

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Taxonomy

Novosphingobium sp. AP12 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGGAACTCCGCCACCTCAGGTACTTCGTCGCGGTCGCCGAGGAGCTGCACTTCCGCCGCGCGGCCGAACGGCTCCACGTCGCCCAGCCGGCCGTCTCCGAGCAGGTACGCAAGCTCGAGGACGAGCTCGGCGTGCGCCTGCTCAACCGCACACAGCGCAGTGTCTCGCTGACCGACGCCGGCTCGGCAATGCTCGACGAGGCGCGCCGCGTGCTCCTACAGGCCGAGCGCGCGATCGCGGTCGCGCGCGACACGCGCAGCTCGGCCGCGACGCGCCTGCGCGTGGGCTACCTGCCCGACTCGCTGCCGGCCGAGGTCCCGCGCGCGCTCCAGGAGCTCGGGCGCACGATGCCGAACCTGCAGGTCTCGCTCGAGACGGGTGCCGCGCGCAAGTTGATCGAGGAGCTGCGCGCCGGGCGCCTCAGCGCCGCCGTCGTGTCGCTGCCGGCGCCGACCGCCGGCCTCCAGCGCACGCTGCTCGGGAGCCAGTCGGCGGTCGTCGCCATGCCGGTCATGCACGCGCACGCGACCGACCCGGAGATCGATCTCGCGCGGCTCGCGCCGGAGCGGATCGTGCTGCTCCCGCGCGAGGTCAACCCCGCCTTCTACGACGGCGTGCTCTCGCTCTGCCGCGACGCCGGCCTGTCGCCGACGATCGTGCACACGCTCGAGCCGCGCATCGAGCTGGCATTGCTCGCGGTCTCCTCCGGCGAGGGGCTTGCGATCCTGCCCGAGTCGGTCTCAGGCGCGGTCGCCGTCGCCGGGATCCGGCTCGTGCCGCTCGCGGCCGACGAGCCGATCTGCGAGAGCGCGGTCCTGACCCAGCCCGACAGCGGCGACCTCGCGACGCAGGCCTTCGTGACCGCGCTCACTCGCGCCGCGCGGCGCCCGCGCACAGCGGCGGCCCCCGCGCCGGCCCCGGTCGAGAGCGTCCCGCTGGTGGCGGCATGA
PROTEIN sequence
Length: 317
MELRHLRYFVAVAEELHFRRAAERLHVAQPAVSEQVRKLEDELGVRLLNRTQRSVSLTDAGSAMLDEARRVLLQAERAIAVARDTRSSAATRLRVGYLPDSLPAEVPRALQELGRTMPNLQVSLETGAARKLIEELRAGRLSAAVVSLPAPTAGLQRTLLGSQSAVVAMPVMHAHATDPEIDLARLAPERIVLLPREVNPAFYDGVLSLCRDAGLSPTIVHTLEPRIELALLAVSSGEGLAILPESVSGAVAVAGIRLVPLAADEPICESAVLTQPDSGDLATQAFVTALTRAARRPRTAAAPAPAPVESVPLVAA*