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H3-16-all-fractions_k255_5564688_2

Organism: H3-16-all-fractions_metab_conc_83

partial RP 35 / 55 MC: 6 BSCG 34 / 51 MC: 7 ASCG 10 / 38 MC: 1
Location: comp(959..1498)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.9
  • Coverage: 178.0
  • Bit_score: 111
  • Evalue 7.50e-22
2'-5' RNA ligase n=1 Tax=Patulibacter medicamentivorans RepID=H0E734_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 39.9
  • Coverage: 178.0
  • Bit_score: 111
  • Evalue 5.40e-22
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 196.0
  • Bit_score: 110
  • Evalue 4.40e-22

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Taxonomy

Patulibacter medicamentivorans → Patulibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGGACCTCCCCGACGCGGCGCGTGTGGAGCTCGCCGAGTGGCGCGCCGAGGCGTTCGCCGGACGCGAGGAGGTCCGGCTGGTCGCGCCCGAGGCGCTGCACGTGACGCTGGTCTTCCTCGGCTACAAGCCGGAGAAGGAGATTCCGCGGATCGGCGAGCTCATGCGGGCATCGGTCCCGGCCGGCGAGCCACCCGAGCTGGTCGCGACGGGAGTGAAGCCGGTGCCGCCGCGCCGGCCACGGCTGTTCGCGCTGGACCTCGAGGACGATGCCGGCCGCGCTGTCGCCGTGCAGGCGGCGCTGTCGGACGCGTTCGAAGCCGAGAAGCTCTACGTGCCCGAGAAGCGGCCGTTCTGGCCGCACGTGACGCTTGCGCGGGTGAAGCGAGGGGCGCGCGCGGAGCCGCTCGAGGCGCCGCCTCCGCCGGCCGATGCGTGGCGGGCGGACGCCGTCACGCTCTACCGGTCGACGCTGCTCCCGCAGGGAGCCCGCTATGACGCGCTGGAGCGGCTGCCGCTGGCGGACCCAGCGGGCTCCTAG
PROTEIN sequence
Length: 180
MDLPDAARVELAEWRAEAFAGREEVRLVAPEALHVTLVFLGYKPEKEIPRIGELMRASVPAGEPPELVATGVKPVPPRRPRLFALDLEDDAGRAVAVQAALSDAFEAEKLYVPEKRPFWPHVTLARVKRGARAEPLEAPPPPADAWRADAVTLYRSTLLPQGARYDALERLPLADPAGS*