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H3-16-all-fractions_k255_8825792_3

Organism: H3-16-all-fractions_metab_conc_83

partial RP 35 / 55 MC: 6 BSCG 34 / 51 MC: 7 ASCG 10 / 38 MC: 1
Location: 967..1725

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F264_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 252.0
  • Bit_score: 263
  • Evalue 1.60e-67
sigma-B/F/G subfamily RNA polymerase sigma-28 factor similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 252.0
  • Bit_score: 263
  • Evalue 4.40e-68
Tax=RBG_16_Actinobacteria_64_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 241.0
  • Bit_score: 277
  • Evalue 1.50e-71

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Taxonomy

RBG_16_Actinobacteria_64_13_curated → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 759
GTGAAGCCGAGCCCGCCCACGAGGTCGCCGGATTCCGACCGCGACCTCCTGAAGCGCTACCACCAGGGTGGGGACACGAGCGCCCGCGAGGAGCTCGTGCAGCGGCACCTGCCGCTCGTGCGCTCGCTCGCCCGTCGCTACGCCGGCCGCGGCGAGGCGCTCGAGGACATCGAGCAGGTCGGCGCGATCGGCCTGTTGAAGGCGATCGACCGCTACGACCTCGAGCGCGAGGTGTCGCTGACCACCTATGCGACGCCGAACGTCGTCGGTGAGATCAAGCGCCACTTCCGGGACAAGGGCTGGGCCATCCGGGTGCCTCGTGGACTGCAGGAGCTGAACGCGAAGATGTCCGGCACGATCGAGCGGCTGACGATCAAGCTGGAGCGCTCGCCGACGATCGCCGAGATCGCGGCCGAGCTCGAGGCCACGCCCGAGCAGGTGCTCGAGGCCATGGAGGCCGGCTCGGCGTACTCCACGGTCTCGCTGTCGACCGGGCCCGGAGGGGGAGGGGACGACGACGACTTCGACCCGATGGAGTCGATCGGGACCGAGGACGAGGAGTACGAGCGCACCGAGCAGCGAGCGTCGCTCGAGCCGGCGCTGGACACGCTGCCCGAGCGCGAGCGCGAGATCCTCCGCATGCGCTTCGAGGACGGCCTGACGCAGACGCAGATCGCCGAGAAGATCGGCATCTCGCAGATGCACGTTTCGCGCCTGATCCGCAAATCACTTGCACGCATGCGCGACCACCTGACGTAG
PROTEIN sequence
Length: 253
VKPSPPTRSPDSDRDLLKRYHQGGDTSAREELVQRHLPLVRSLARRYAGRGEALEDIEQVGAIGLLKAIDRYDLEREVSLTTYATPNVVGEIKRHFRDKGWAIRVPRGLQELNAKMSGTIERLTIKLERSPTIAEIAAELEATPEQVLEAMEAGSAYSTVSLSTGPGGGGDDDDFDPMESIGTEDEEYERTEQRASLEPALDTLPEREREILRMRFEDGLTQTQIAEKIGISQMHVSRLIRKSLARMRDHLT*